Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT5G03720.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G03720
Gene model
AT5G03720.1
Gene names and synonyms
AT-HSFA3 iHOP
HSFA3 iHOP
Description
AT-HSFA3 (Arabidopsis thaliana heat shock transcription factor A3); DNA binding / transcription factor
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

908246 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g32590.2 Score: 1
LOC_Os02g32590.1 Score: 0.96

Expression data

Expressed Sequence Tags

At.45813
Arabidopsis thaliana AT-HSFA3 (Arabidopsis thaliana heat shock transcription factor A3); DNA binding / transcription factor (AT-HSFA3) mRNA, complete cds /cds=p(1,1239) /gb=NM_120453
At.5971
Arabidopsis thaliana ATHSFA1E (Arabidopsis thaliana heat shock transcription factor A1E); DNA binding / transcription factor (ATHSFA1E) mRNA, complete cds /cds=p(143,1549) /gb=NM_111169
Os.23778
Oryza sativa Japonica Group cDNA clone:J033073P11, full insert sequence /cds=p(81,1577) /gb=AK101934
Pba.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Pth.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055

Domain Architecture

HSF_DNA-bind PF00447 AT5G03720.1
DomainStartEndBit scoreE-value
HSF_DNA-bind54221187.14.5e-53

Sequences