version: 3.0
Gene model: AT5G04940.1
Identification
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Genome Databases
External resources
Orthologs and co-orthologs (in-paralogs)
Look for sequence homologs using SIMAP@MIPS
SIMAPOrtholog identification by INPARANOID
Arabidopsis lyrata
487281 Score: 1Arabidopsis thaliana
AT5G04940.1 Score: 1AT5G04940.2 Score: 1
Arabidopsis thaliana
AT5G04940.1 Score: 1AT5G04940.2 Score: 1
Oryza sativa subsp. japonica
LOC_Os11g38900.1 Score: 1Populus trichocarpa
590678 Score: 1Arabidopsis thaliana
AT5G04940.1 Score: 1AT5G04940.2 Score: 1
Sorghum bicolor
4873608 Score: 1Arabidopsis thaliana
AT5G04940.1 Score: 1AT5G04940.2 Score: 1
Arabidopsis thaliana
AT5G04940.1 Score: 1AT5G04940.2 Score: 1
Zea mays
GRMZM2G060478_P01 Score: 1Expression data
- AthaMap - TFBS in the promoter of this gene
- eFP Browser - Uni Toronto - Natural Variation
- MPSS data
- eFP Browser - Uni Toronto - Abiotic stresses
- eFP Browser - Uni Toronto - Developmental processes
- NCBI EST Profile Viewer (UniGene: At.11687)
- NCBI EST Profile Viewer (UniGene: At.8375)
- NCBI EST Profile Viewer (UniGene: Mtr.13736)
- NCBI EST Profile Viewer (UniGene: Os.3123)
- NCBI EST Profile Viewer (UniGene: Os.97866)
- NCBI EST Profile Viewer (UniGene: Vvi.14480)
Expressed Sequence Tags
- At.11687
- Arabidopsis thaliana SUVH3 (SU(VAR)3-9 HOMOLOG 3) (SUVH3) mRNA, complete cds /cds=p(212,2221) /gb=NM_105968
- At.8375
- Arabidopsis thaliana SUVH1 (SUVH1) mRNA, complete cds /cds=p(363,2375) /gb=AF344444
- Mtr.13736
- EST648070 KV3 Medicago truncatula cDNA clone KV3-49K23, mRNA sequence /clone=KV3-49K23 /gb=CB891101
- Os.3123
- Oryza sativa Japonica Group cDNA clone:001-026-A12, full insert sequence /gb=AK059336
- Os.97866
- Oryza sativa Japonica Group cDNA clone:J033092A08, full insert sequence /cds=p(393,2834) /gb=AK102379
- Vvi.14480
- WIN1127.C21_D07 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1127_D07 3', mRNA sequence /clone=WIN1127_D07 /clone_end=3' /gb=EC986263