Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT5G18550.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G18550
Gene model
AT5G18550.1
Description
nucleic acid binding
Family
C3H
3D structure (top 5)
1M9O 2RPP 2E5S 2RHK 2CQE
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

488738 Score: 1

Populus trichocarpa

229700 Score: 1

Expression data

Expressed Sequence Tags

At.22535
Arabidopsis thaliana nucleic acid binding (AT5G18550) mRNA, complete cds /cds=p(338,1735) /gb=NM_121860
At.27771
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-11-O09 /cds=p(267,1655) /gb=AK230312
Mtr.10686
EST647280 HOGA Medicago truncatula cDNA clone HOGA-31I22, mRNA sequence /clone=HOGA-31I22 /gb=CB894488

Domain Architecture

zf-CCCH PF00642 AT5G18550.1
DomainStartEndBit scoreE-value
zf-CCCH527846.21.2e-10
zf-CCCH9812446.41e-10
zf-CCCH14617245.42e-10
zf-CCCH30132747.74.1e-11
zf-CCCH34637240.75.2e-09

Sequences