Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT5G43840.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G43840
Gene model
AT5G43840.1
Gene names and synonyms
AT-HSFA6A iHOP
HSFA6A iHOP
Description
AT-HSFA6A (Arabidopsis thaliana heat shock transcription factor A6A); DNA binding / transcription factor
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

356702 Score: 1

Ostreococcus lucimarinus

8561 Score: 1

Selaginella moellendorffii

107503 Score: 1

Expression data

Expressed Sequence Tags

At.55345
Arabidopsis thaliana AT-HSFA6A (Arabidopsis thaliana heat shock transcription factor A6A); DNA binding / transcription factor (AT-HSFA6A) mRNA, complete cds /cds=p(1,849) /gb=NM_123751
Vvi.24263
VVB181A04_414523 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB181A04 5, mRNA sequence /clone=VVB181A04 /clone_end=5' /gb=CD721308

Domain Architecture

HSF_DNA-bind PF00447 AT5G43840.1
DomainStartEndBit scoreE-value
HSF_DNA-bind181731891.2e-53

Sequences