Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT5G44260.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G44260
Gene model
AT5G44260.1
Description
zinc finger (CCCH-type) family protein
Family
C3H
3D structure (top 5)
3D2Q 2RPP 1M9O 2E5S 3D2N
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

494567 Score: 1

Expression data

Expressed Sequence Tags

At.12895
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT2G19810) mRNA, complete cds /cds=p(107,1186) /gb=NM_127539
At.20940
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT5G44260) mRNA, complete cds /cds=p(107,1252) /gb=NM_123793
At.23916
Arabidopsis thaliana ATCTH (Arabidopsis thaliana Cys3His zinc finger protein); transcription factor (ATCTH) mRNA, complete cds /cds=p(100,1047) /gb=NM_128150
At.43010
Arabidopsis thaliana At1g03790 mRNA for unknown protein, complete cds, clone: RAFL16-76-P06 /cds=p(65,1246) /gb=AK117219
At.4530
Arabidopsis thaliana unknown protein (At4g29190) mRNA, complete cds /cds=p(67,1137) /gb=AY045970
Mtr.11645
NF111B08PL1F1073 Phosphate starved leaf Medicago truncatula cDNA clone NF111B08PL 5', mRNA sequence /clone=NF111B08PL /clone_end=5' /gb=BI264045
Mtr.14001
METAU86TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY476756
Os.31975
Oryza sativa Japonica Group cDNA clone:002-102-F01, full insert sequence /gb=AK106392
Sbi.18549
PI1_57_C07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA, mRNA sequence /gb=BE596523

Domain Architecture

zf-CCCH PF00642 AT5G44260.1
DomainStartEndBit scoreE-value
zf-CCCH101127352.7e-07
zf-CCCH1371594.40.36

Sequences