Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT5G45710.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G45710
Gene model
AT5G45710.1
Gene names and synonyms
AT-HSFA4C iHOP
HSFA4C iHOP
RHA1 iHOP
Description
AT-HSFA4C (Arabidopsis thaliana heat shock transcription factor A4C); DNA binding / transcription factor
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

494414 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g54550.1 Score: 1

Sorghum bicolor

5002569 Score: 1

Expression data

Expressed Sequence Tags

At.1951
Arabidopsis thaliana AT4g18880/F13C5_50 mRNA, complete cds /cds=p(513,1718) /gb=AY125512
At.43916
Arabidopsis thaliana AT-HSFA4C (Arabidopsis thaliana heat shock transcription factor A4C); DNA binding / transcription factor (AT-HSFA4C) mRNA, complete cds /cds=p(683,1432) /gb=NM_203162
Hv.9738
HV_CEb0010C13f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0010C13f, mRNA sequence /clone=HV_CEb0010C13f /gb=BE216310
Os.59230
Oryza sativa Japonica Group cDNA clone:J013165J23, full insert sequence /gb=AK072210
Pth.11766
F069P67Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence /gb=BI136536
Vvi.23635
S9B09290 Ripening Berries (VvS9) Vitis vinifera cDNA clone S9B09290, mRNA sequence /clone=S9B09290 /gb=EE101448

Domain Architecture

HSF_DNA-bind PF00447 AT5G45710.1
DomainStartEndBit scoreE-value
HSF_DNA-bind12185167.24.3e-47

Sequences