Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT5G49200.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G49200
Gene model
AT5G49200.1
Description
WD-40 repeat family protein / zfwd4 protein (ZFWD4)
Family
C3H
3D structure (top 5)
3DM0 2VDU 3F3F 1K8K 2OVR
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.30265
Arabidopsis thaliana WD-40 repeat family protein / zfwd3 protein (ZFWD3) (AT5G40880) mRNA, complete cds /cds=p(587,2005) /gb=NM_123453
At.64278
Arabidopsis thaliana WD-40 repeat family protein / zfwd4 protein (ZFWD4) (AT5G49200) mRNA, complete cds /cds=p(1,1260) /gb=NM_124297
Os.23123
Oryza sativa Japonica Group cDNA clone:J033090J15, full insert sequence /cds=p(295,1320) /gb=AK102324

Domain Architecture

zf-CCCH PF00642 AT5G49200.1
DomainStartEndBit scoreE-value
zf-CCCH9011522.60.0014
WD4012115922.60.0015
WD4024828437.16.2e-08
WD4028832431.43.4e-06

Sequences