version: 3.0
Gene model: AT5G56110.1
Identification
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Genome Databases
External resources
Orthologs and co-orthologs (in-paralogs)
Look for sequence homologs using SIMAP@MIPS
SIMAPOrtholog identification by INPARANOID
Arabidopsis lyrata
331925 Score: 1Carica papaya
evm.TU.supercontig_12.88 Score: 1Vitis vinifera
GSVIVP00033458001 Score: 1Expression data
- AthaMap - TFBS in the promoter of this gene
- eFP Browser - Uni Toronto - Natural Variation
- MPSS data
- eFP Browser - Uni Toronto - Abiotic stresses
- eFP Browser - Uni Toronto - Developmental processes
- NCBI EST Profile Viewer (UniGene: At.10904)
- NCBI EST Profile Viewer (UniGene: At.10920)
- NCBI EST Profile Viewer (UniGene: At.2261)
- NCBI EST Profile Viewer (UniGene: At.2669)
- NCBI EST Profile Viewer (UniGene: At.48268)
- NCBI EST Profile Viewer (UniGene: At.50533)
- NCBI EST Profile Viewer (UniGene: At.5394)
- NCBI EST Profile Viewer (UniGene: Hv.26842)
- NCBI EST Profile Viewer (UniGene: Mtr.19694)
- NCBI EST Profile Viewer (UniGene: Os.3390)
- NCBI EST Profile Viewer (UniGene: Os.58166)
- NCBI EST Profile Viewer (UniGene: Os.80847)
- NCBI EST Profile Viewer (UniGene: Os.83361)
- NCBI EST Profile Viewer (UniGene: Os.9336)
- NCBI EST Profile Viewer (UniGene: Ppa.49)
- NCBI EST Profile Viewer (UniGene: Pth.12469)
- NCBI EST Profile Viewer (UniGene: Sbi.2545)
- NCBI EST Profile Viewer (UniGene: Sbi.8066)
Expressed Sequence Tags
- At.10904
- Arabidopsis thaliana AtMYB35 (myb domain protein 35); DNA binding / transcription factor (AtMYB35) mRNA, complete cds /cds=p(1,954) /gb=NM_113767
- At.10920
- Arabidopsis thaliana AtMYB74 (myb domain protein 74); DNA binding / transcription factor (AtMYB74) mRNA, complete cds /cds=p(104,1078) /gb=NM_116749
- At.2261
- Arabidopsis thaliana ATM4/ATMYB102 (ARABIDOPSIS MYB-LIKE 102); DNA binding / transcription factor (ATM4/ATMYB102) mRNA, complete cds /cds=p(109,1161) /gb=NM_118264
- At.2669
- Arabidopsis thaliana AtMYB41 (myb domain protein 41); DNA binding / transcription factor (AtMYB41) mRNA, complete cds /cds=p(1,849) /gb=NM_118951
- At.48268
- Arabidopsis thaliana AtMYB93 (myb domain protein 93); DNA binding / transcription factor (AtMYB93) mRNA, complete cds /cds=p(1,1098) /gb=NM_103190
- At.50533
- Arabidopsis thaliana ATMYB103/ATMYB80/MS188/MYB103 (MYB DOMAIN PROTEIN 80); DNA binding / transcription factor (ATMYB103/ATMYB80/MS188/MYB103) mRNA, complete cds /cds=p(1,963) /gb=NM_124993
- At.5394
- Arabidopsis thaliana AtMIXTA/AtMYB16 (myb domain protein 16); DNA binding / transcription factor (AtMIXTA/AtMYB16) mRNA, complete cds /cds=p(224,1204) /gb=NM_121535
- Hv.26842
- Hordeum vulgare subsp. vulgare cDNA clone: FLbaf97l09, mRNA sequence /gb=AK248579
- Mtr.19694
- EST1224335 MTY Medicago truncatula cDNA clone MTYA430, mRNA sequence /clone=MTYA430 /gb=DW015374
- Os.3390
- O.sativa mRNA for myb factor, 1355 bp /cds=p(116,1222) /gb=Y11415
- Os.58166
- Oryza sativa (japonica cultivar-group) Os04g0470600 (Os04g0470600) mRNA, complete cds /cds=p(1,1119) /gb=NM_001059587
- Os.80847
- Oryza sativa Japonica Group cDNA, clone: J090031E07, full insert sequence /gb=AK288415
- Os.83361
- Oryza sativa (japonica cultivar-group) Os02g0579300 (Os02g0579300) mRNA, complete cds /cds=p(1,1029) /gb=NM_001053764
- Os.9336
- CT849551 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone CONTIG6869, mRNA sequence /clone=CONTIG6869 /gb=CT849551
- Ppa.49
- P.patens mRNA Pp2 /cds=p(134,1399) /gb=X67050
- Pth.12469
- UM45TE12.5pR Populus female catkins cDNA library Populus trichocarpa cDNA clone UM45TE12 5', mRNA sequence /clone=UM45TE12 /clone_end=5' /gb=DN500996
- Sbi.2545
- OX1_61_A11.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_61_A11_A002 5', mRNA sequence /clone=OX1_61_A11_A002 /clone_end=5' /gb=CN138063 /gi=45972186
- Sbi.8066
- WOUND1_59_F10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_59_F10_A002 5', mRNA sequence /clone=WOUND1_59_F10_A002 /clone_end=5' /gb=CN148942 /gi=45990343




