version: 3.0
Gene model: AT5G60410.4
Identification
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Genome Databases
External resources
Orthologs and co-orthologs (in-paralogs)
Look for sequence homologs using SIMAP@MIPS
SIMAPOrtholog identification by INPARANOID
Chlorella sp. NC64A
52345 Score: 1Arabidopsis thaliana
AT5G60410.2 Score: 1AT5G60410.3 Score: 1
AT5G60410.4 Score: 1
AT5G60410.5 Score: 1
AT5G60410.1 Score: 0.992
Arabidopsis thaliana
AT5G60410.2 Score: 1.002AT5G60410.1 Score: 1
AT5G60410.5 Score: 1
AT5G60410.4 Score: 0.96
Carica papaya
evm.TU.supercontig_139.75 Score: 1Coccomyxa sp. C-169
83729 Score: 1Arabidopsis thaliana
AT5G60410.4 Score: 1AT5G60410.2 Score: 0.965
AT5G60410.5 Score: 0.965
AT5G60410.1 Score: 0.964
AT5G60410.3 Score: 0.926
Arabidopsis thaliana
AT5G60410.3 Score: 1AT5G60410.4 Score: 0.993
AT5G60410.1 Score: 0.992
AT5G60410.2 Score: 0.992
AT5G60410.5 Score: 0.992
Arabidopsis thaliana
AT5G60410.2 Score: 1.001AT5G60410.1 Score: 1
AT5G60410.5 Score: 1
AT5G60410.4 Score: 0.974
AT5G60410.3 Score: 0.907
Oryza sativa subsp. japonica
LOC_Os05g03430.2 Score: 1LOC_Os05g03430.1 Score: 0.995
Physcomitrella patens
165698 Score: 1Arabidopsis thaliana
AT5G60410.3 Score: 1AT5G60410.1 Score: 0.99
AT5G60410.2 Score: 0.99
AT5G60410.4 Score: 0.99
AT5G60410.5 Score: 0.99
Arabidopsis thaliana
AT5G60410.3 Score: 1AT5G60410.4 Score: 0.986
AT5G60410.1 Score: 0.984
AT5G60410.2 Score: 0.984
AT5G60410.5 Score: 0.984
Sorghum bicolor
4893760 Score: 1Arabidopsis thaliana
AT5G60410.2 Score: 1.001AT5G60410.1 Score: 1
AT5G60410.5 Score: 1
AT5G60410.4 Score: 0.975
AT5G60410.3 Score: 0.91
Selaginella moellendorffii
93518 Score: 1Arabidopsis thaliana
AT5G60410.2 Score: 1.001AT5G60410.1 Score: 1
AT5G60410.3 Score: 1
AT5G60410.4 Score: 1
AT5G60410.5 Score: 1
Arabidopsis thaliana
AT5G60410.2 Score: 1AT5G60410.5 Score: 1
AT5G60410.1 Score: 0.965
AT5G60410.4 Score: 0.931
Vitis vinifera
GSVIVP00024500001 Score: 1Arabidopsis thaliana
AT5G60410.2 Score: 1.001AT5G60410.1 Score: 1
AT5G60410.5 Score: 1
AT5G60410.4 Score: 0.974
AT5G60410.3 Score: 0.907
Zea mays
GRMZM2G155123_P02 Score: 1GRMZM2G155123_P03 Score: 1
Chlamydomonas reinhardtii
330078 Score: 1Arabidopsis thaliana
AT5G60410.2 Score: 1.001AT5G60410.1 Score: 1
AT5G60410.3 Score: 1
AT5G60410.4 Score: 1
AT5G60410.5 Score: 1
Expression data
- AthaMap - TFBS in the promoter of this gene
- eFP Browser - Uni Toronto - Natural Variation
- MPSS data
- eFP Browser - Uni Toronto - Abiotic stresses
- eFP Browser - Uni Toronto - Developmental processes
- NCBI EST Profile Viewer (UniGene: At.43746)
- NCBI EST Profile Viewer (UniGene: Hv.17786)
- NCBI EST Profile Viewer (UniGene: Hv.27008)
- NCBI EST Profile Viewer (UniGene: Mtr.12920)
- NCBI EST Profile Viewer (UniGene: Mtr.22469)
- NCBI EST Profile Viewer (UniGene: Os.4647)
- NCBI EST Profile Viewer (UniGene: Pth.2061)
- NCBI EST Profile Viewer (UniGene: Sbi.11224)
Expressed Sequence Tags
- At.43746
- Arabidopsis thaliana SUMO E3 ligase (SIZ1) mRNA, complete cds /cds=p(240,2861) /gb=AY700572
- Hv.17786
- HO02A03S HO Hordeum vulgare cDNA clone HO02A03 5-PRIME, mRNA sequence /clone=HO02A03 /clone_end=5' /gb=CD054248
- Hv.27008
- HU09G06r HU Hordeum vulgare subsp. vulgare cDNA clone HU09G06 5-PRIME, mRNA sequence /clone=HU09G06 /clone_end=5' /gb=CA007920
- Mtr.12920
- EST510425 HOGA Medicago truncatula cDNA clone pHOGA-23L12 5' end, mRNA sequence /clone=pHOGA-23L12 /clone_end=5' /gb=BG648806
- Mtr.22469
- EST645260 GPOD Medicago truncatula cDNA clone GPOD-34Z36, mRNA sequence /clone=GPOD-34Z36 /gb=CB066637
- Os.4647
- Oryza sativa Japonica Group cDNA clone:001-116-F09, full insert sequence /cds=p(251,2878) /gb=AK105290
- Pth.2061
- Q056A07 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873482
- Sbi.11224
- LG1_285_D12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA sequence /gb=AW564180