Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT5G60440.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G60440
Gene model
AT5G60440.1
Description
MADS-box protein (AGL62)
Family
MADS
3D structure (top 5)
1N6J 1EGW 1K6O 1MNM 1HBX
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

358254 Score: 1

Carica papaya

evm.TU.supercontig_106.16 Score: 1

Arabidopsis thaliana

AT2G24840.1 Score: 1
AT5G60440.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g74440.1 Score: 1
LOC_Os09g02830.1 Score: 1

Populus trichocarpa

557553 Score: 1

Sorghum bicolor

4152679 Score: 1

Vitis vinifera

GSVIVP00038600001 Score: 1
GSVIVP00038603001 Score: 1

Arabidopsis thaliana

AT2G24840.1 Score: 1
AT5G60440.1 Score: 1

Zea mays

GRMZM2G163335_P01 Score: 1
GRMZM2G171658_P01 Score: 1

Expression data

Expressed Sequence Tags

At.29160
Arabidopsis thaliana MADS-box protein AGL62 (AGL62) mRNA, complete cds /cds=p(36,935) /gb=EU493093
At.52900
58-L022243-065-008-B08-SeLB MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 008-B08, mRNA sequence /clone=008-B08 /gb=DR750384

Domain Architecture

SRF-TF PF00319 AT5G60440.1
DomainStartEndBit scoreE-value
SRF-TF146477.44.7e-20

Sequences