Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT5G62020.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G62020
Gene model
AT5G62020.1
Gene names and synonyms
AT-HSFB2A iHOP
HSFB2A iHOP
Description
AT-HSFB2A (Arabidopsis thaliana heat shock transcription factor B2A); DNA binding / transcription factor
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

919451 Score: 1

Carica papaya

evm.TU.supercontig_107.29 Score: 1

Sorghum bicolor

5000270 Score: 1

Arabidopsis thaliana

AT4G11660.1 Score: 1
AT5G62020.1 Score: 1

Zea mays

GRMZM2G098696_P01 Score: 1
GRMZM2G164909_P01 Score: 1
GRMZM2G098696_P02 Score: 0.982

Expression data

Expressed Sequence Tags

At.5973
Arabidopsis thaliana AT-HSFB2A (Arabidopsis thaliana heat shock transcription factor B2A); DNA binding / transcription factor (AT-HSFB2A) mRNA, complete cds /cds=p(124,1023) /gb=NM_125595
Mtr.10591
EST1225248 MTY Medicago truncatula cDNA clone MTYAF37, mRNA sequence /clone=MTYAF37 /gb=DW016287

Domain Architecture

HSF_DNA-bind PF00447 AT5G62020.1
DomainStartEndBit scoreE-value
HSF_DNA-bind22233157.14.9e-44

Sequences