Gene model: AT5G65210.4

Species: Arabidopsis thaliana Locus AT5G65210 Gene model AT5G65210.4 Gene names and synonyms TGA1 iHOP Description TGA1; DNA binding / calmodulin binding / transcription factor Family bZIP

• KEGG
• TAIR

• GabiPD
• PhosPhAT
• ProMEX

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

886806 Score: 1

Arabidopsis thaliana

AT5G65210.1 Score: 1
AT5G65210.2 Score: 1
AT5G65210.3 Score: 1
AT5G65210.4 Score: 1
AT5G65210.5 Score: 1

Arabidopsis thaliana

AT5G65210.1 Score: 1
AT5G65210.2 Score: 1
AT5G65210.3 Score: 1
AT5G65210.4 Score: 1
AT5G65210.5 Score: 1

Carica papaya

evm.TU.supercontig_100.2 Score: 1

Populus trichocarpa

217692 Score: 1

Arabidopsis thaliana

AT5G65210.1 Score: 1
AT5G65210.2 Score: 1
AT5G65210.3 Score: 1
AT5G65210.4 Score: 1
AT5G65210.5 Score: 1

Arabidopsis thaliana

AT5G65210.1 Score: 1
AT5G65210.2 Score: 1
AT5G65210.3 Score: 1
AT5G65210.4 Score: 1
AT5G65210.5 Score: 1

Vitis vinifera

GSVIVP00019423001 Score: 1

Arabidopsis thaliana

AT5G65210.1 Score: 1
AT5G65210.2 Score: 1
AT5G65210.3 Score: 1
AT5G65210.4 Score: 1
AT5G65210.5 Score: 1

Zea mays

GRMZM2G131961_P02 Score: 1.012
GRMZM2G172246_P01 Score: 1.012
GRMZM2G131961_P05 Score: 1
GRMZM2G172246_P05 Score: 1

• AthaMap - TFBS in the promoter of this gene
• eFP Browser - Uni Toronto - Natural Variation
• MPSS data
• eFP Browser - Uni Toronto - Abiotic stresses
• eFP Browser - Uni Toronto - Developmental processes
• NCBI EST Profile Viewer (UniGene: At.15614)
• NCBI EST Profile Viewer (UniGene: At.16522)
• NCBI EST Profile Viewer (UniGene: At.20818)
• NCBI EST Profile Viewer (UniGene: At.23884)
• NCBI EST Profile Viewer (UniGene: At.24071)
• NCBI EST Profile Viewer (UniGene: At.70207)
• NCBI EST Profile Viewer (UniGene: Hv.6102)
• NCBI EST Profile Viewer (UniGene: Os.10220)
• NCBI EST Profile Viewer (UniGene: Os.15238)
• NCBI EST Profile Viewer (UniGene: Os.20077)
• NCBI EST Profile Viewer (UniGene: Os.42388)
• NCBI EST Profile Viewer (UniGene: Os.439)
• NCBI EST Profile Viewer (UniGene: Os.54058)
• NCBI EST Profile Viewer (UniGene: Os.56267)
• NCBI EST Profile Viewer (UniGene: Ppa.11800)
• NCBI EST Profile Viewer (UniGene: Ppa.13187)
• NCBI EST Profile Viewer (UniGene: Ppa.23006)
• NCBI EST Profile Viewer (UniGene: Pth.11053)
• NCBI EST Profile Viewer (UniGene: Pth.16575)

At.15614

Arabidopsis thaliana mRNA for bZIP transcription factor TGA3/AtbZIP22, clone: RAFL09-56-B20 /gb=AK227036

At.16522

Arabidopsis thaliana bZIP family transcription factor (AT1G77920) mRNA, complete cds /cds=p(464,1570) /gb=NM_106441

At.20818

Arabidopsis thaliana TGA1 (TGA1) mRNA, complete cds /cds=p(649,1545) /gb=NM_001085331

At.23884

Arabidopsis thaliana At5g06950 mRNA for putative bZip transcription factor AtbZip20/tga2, complete cds, clone: RAFL17-34-M19 /cds=p(278,1270) /gb=AK117686

At.24071

Arabidopsis thaliana TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor (TGA4) mRNA, complete cds /cds=p(256,1350) /gb=NM_121041

At.70207

Arabidopsis thaliana TGA6 (TGA1a-related gene 6); DNA binding / transcription factor (TGA6) mRNA, complete cds /cds=p(422,1396) /gb=NM_202564

Hv.6102

Hordeum vulgare subsp. vulgare cDNA clone: FLbaf125e16, mRNA sequence /gb=AK251460

Os.10220

Oryza sativa OsNIF2 mRNA for bZIP transcription factor, complete cds /cds=p(506,1510) /gb=AB051295

Os.15238

Oryza sativa Japonica Group cDNA, clone: J075183E21, full insert sequence /cds=p(401,1402) /gb=AK242257

Os.20077

Oryza sativa Japonica Group cDNA clone:002-121-A09, full insert sequence /cds=p(235,1404) /gb=AK107028

Os.42388

Oryza sativa Japonica Group cDNA clone:J033034J12, full insert sequence /cds=p(130,1749) /gb=AK101338

Os.439

Oryza sativa Japonica Group cDNA, clone: J090049N20, full insert sequence /cds=p(429,1418) /gb=AK242743

Os.54058

Oryza sativa Japonica Group cDNA clone:J033052J02, full insert sequence /cds=p(458,1927) /gb=AK101620

Os.56267

Oryza sativa Japonica Group cDNA clone:002-146-A04, full insert sequence /cds=p(156,1313) /gb=AK109719

Ppa.11800

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_71017) mRNA, complete cds /cds=p(1,987) /gb=XM_001757906

Ppa.13187

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_188998) mRNA, complete cds /cds=p(161,1180) /gb=XM_001770508

Ppa.23006

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_147335) mRNA, partial cds /cds=p(1,873) /gb=XM_001779404

Pth.11053

Populus trichocarpa clone PX0011_D24 unknown mRNA /cds=p(1293,1982) /gb=EF144213

Pth.16575

Populus trichocarpa clone WS0111_I20 unknown mRNA /cds=p(417,1487) /gb=EF145013

protein sequence
transcript sequence