Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT5G67580.2

Identification

Species:
Arabidopsis thaliana
Locus
AT5G67580
Gene model
AT5G67580.2
Gene names and synonyms
ATTRB2 iHOP
TRB2 iHOP
Description
ATTRB2/TRB2 (TELOMERE REPEAT BINDING FACTOR 2); DNA binding / transcription factor
Family
MYB-related
3D structure (top 5)
1UHM 1HST 1USS 1UST 1GHC
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

332814 Score: 1

Arabidopsis thaliana

AT5G67580.1 Score: 1
AT5G67580.2 Score: 1

Arabidopsis thaliana

AT5G67580.1 Score: 1
AT5G67580.2 Score: 1

Carica papaya

evm.TU.supercontig_6.10 Score: 1

Populus trichocarpa

807195 Score: 1

Arabidopsis thaliana

AT5G67580.1 Score: 1
AT5G67580.2 Score: 1

Expression data

Expressed Sequence Tags

At.26646
Arabidopsis thaliana telomere repeat binding factor 3 (TRB3) mRNA, complete cds /cds=p(221,1108) /gb=U83839
At.7636
Arabidopsis thaliana ATTRB2/TRB2 (TELOMERE REPEAT BINDING FACTOR 2); DNA binding / transcription factor (ATTRB2/TRB2) mRNA, complete cds /cds=p(255,1154) /gb=NM_180955
Mtr.17478
METB235TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY477379

Domain Architecture

Myb_DNA-binding PF00249 AT5G67580.2
DomainStartEndBit scoreE-value
Myb_DNA-binding55734.73.3e-07
Linker_histone1231890.30.00099

Sequences