Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: CMQ213C

Identification

Species:
Cyanidioschyzon merolae
Gene model
CMQ213C
Description
sigma subunit for chloroplast RNA polymerase
Family
Sigma70-like
3D structure (top 5)
1SIG 1L0O 2A6H 1L9Z 1RP3
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

470915 Score: 1

Arabidopsis thaliana

AT1G08540.1 Score: 1

Chlorella sp. NC64A

35462 Score: 1

Carica papaya

evm.TU.supercontig_56.12 Score: 1

Coccomyxa sp. C-169

18553 Score: 1

Ostreococcus tauri

18021 Score: 1

Sorghum bicolor

4779347 Score: 1

Selaginella moellendorffii

117159 Score: 1

Vitis vinifera

GSVIVP00028718001 Score: 1

Zea mays

GRMZM2G003182_P01 Score: 1
GRMZM2G090783_P01 Score: 1
GRMZM2G100086_P01 Score: 1
GRMZM2G164084_P01 Score: 1

Domain Architecture

Sigma70_r2 PF04542 CMQ213C
DomainStartEndBit scoreE-value
Sigma70_r218228159.61.2e-14
Sigma70_r328536776.97.1e-20
Sigma70_r439144562.41.7e-15

Sequences