Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: CMR165C

Identification

Species:
Cyanidioschyzon merolae
Gene model
CMR165C
Description
sigma subunit for chloroplast RNA polymerase
Family
Sigma70-like
3D structure (top 5)
1SIG 1L0O 2A6H 1L9Z 1RP3
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Micromonas pusilla CCMP1545

47508 Score: 1

Micromonas sp. RCC299

100150 Score: 1

Ostreococcus lucimarinus

41331 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g26160.1 Score: 1

Physcomitrella patens

178031 Score: 1

Populus trichocarpa

780378 Score: 1

Sorghum bicolor

4866801 Score: 1

Domain Architecture

Sigma70_r1_2 PF00140 CMR165C
DomainStartEndBit scoreE-value
Sigma70_r1_232335955.42.1e-13
Sigma70_r24024721008.3e-27
Sigma70_r347655554.44.4e-13
Sigma70_r457763051.72.9e-12

Sequences