Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G004548_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G004548_P01
Family
PLATZ

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G004548_P01 Score: 1
GRMZM2G149249_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g46610.1 Score: 1

Sorghum bicolor

148745 Score: 1

Zea mays

GRMZM2G004548_P01 Score: 1
GRMZM2G149249_P01 Score: 1

Expression data

Expressed Sequence Tags

At.16977
Arabidopsis thaliana mRNA for putative terpene synthase, complete cds, clone: RAFL14-19-L18 /cds=p(159,1142) /gb=AK227599
At.19392
Arabidopsis thaliana zinc-binding family protein (AT1G76590) mRNA, complete cds /cds=p(185,922) /gb=NM_106309
At.2047
Arabidopsis thaliana zinc-binding family protein (AT4G17900) mRNA, complete cds /cds=p(177,860) /gb=NM_117900
Hv.2565
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf110d04, mRNA sequence /gb=AK251313
Hv.9148
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf180j17, mRNA sequence /gb=AK252895
Mtr.13224
EST608861 GLSD Medicago truncatula cDNA clone pGLSD-31N5, mRNA sequence /clone=pGLSD-31N5 /gb=BQ123285
Mtr.14791
METB573TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY477695
Mtr.8325
Medicago truncatula clone MTYF5_F6_F7_F81G-L-13 unknown mRNA /cds=p(144,866) /gb=BT051885
Os.14686
Oryza sativa Japonica Group cDNA clone:J023008F14, full insert sequence /cds=p(235,984) /gb=AK069139
Os.18638
Oryza sativa Japonica Group cDNA clone:J013092A21, full insert sequence /cds=p(94,867) /gb=AK066953
Pba.7723
WS02525.B21_P15 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02525_P15 3', mRNA sequence /clone=WS02525_P15 /clone_end=3' /gb=DT484635
Pba.880
WS02520.B21_M16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02520_M16 3', mRNA sequence /clone=WS02520_M16 /clone_end=3' /gb=DT482790
Ppa.20059
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_189465) mRNA, complete cds /cds=p(1,627) /gb=XM_001771021
Pth.880
WS02518.B21_F22 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02518_F22 3', mRNA sequence /clone=WS02518_F22 /clone_end=3' /gb=CV243262
Ptp.6002
N068G12 Populus bark cDNA library Populus tremula x Populus tremuloides cDNA clone N068G12 5', mRNA sequence /clone=N068G12 /clone_end=5' /gb=CK110608
Sbi.1612
HS1_1_E11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_1_E11_A012 5', mRNA sequence /clone=HS1_1_E11_A012 /clone_end=5' /gb=CD203724 /gi=30932042
Sbi.18732
ANR1_1_C01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_1_C01_A002 5', mRNA sequence /clone=ANR1_1_C01_A002 /clone_end=5' /gb=CX606173 /gi=57803404
Vvi.7142
WIN0810.C21_F20 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN0810_F20 3', mRNA sequence /clone=WIN0810_F20 /clone_end=3' /gb=EC961020
Vvi.9436
S1G02844 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G02844, mRNA sequence /clone=S1G02844 /gb=EE077015

Domain Architecture

PLATZ PF04640 GRMZM2G004548_P01
DomainStartEndBit scoreE-value
PLATZ49160265.41.3e-76

Sequences