Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G005066_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G005066_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G005066_P01 Score: 1
GRMZM2G010213_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g10350.1 Score: 1

Expression data

Expressed Sequence Tags

At.20521
Arabidopsis thaliana MYB4 (myb domain protein 4); transcription factor (MYB4) mRNA, complete cds /cds=p(316,1164) /gb=NM_120023
At.28679
Arabidopsis thaliana AtMYB32 (myb domain protein 32); DNA binding / transcription factor (AtMYB32) mRNA, complete cds /cds=p(79,903) /gb=NM_119665
Hv.21408
H.vulgare myb1 mRNA /cds=p(212,1015) /gb=X70877
Os.81367
Oryza sativa mRNA for transcriptional activator /cds=p(91,909) /gb=Y15219
Os.9336
CT849551 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone CONTIG6869, mRNA sequence /clone=CONTIG6869 /gb=CT849551
Ptp.4185
T008E08 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU830456
Sbi.8066
WOUND1_59_F10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_59_F10_A002 5', mRNA sequence /clone=WOUND1_59_F10_A002 /clone_end=5' /gb=CN148942 /gi=45990343
Vvi.3370
Vitis vinifera MYB5b mRNA, complete cds /cds=p(31,966) /gb=AY899404

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G005066_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding146144.34.9e-10
Myb_DNA-binding6711332.71.4e-06

Sequences