Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G005684_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G005684_P01
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G005684_P01 Score: 1
GRMZM2G165272_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g35790.1 Score: 1
LOC_Os09g35790.2 Score: 1

Sorghum bicolor

5000270 Score: 1

Zea mays

GRMZM2G005684_P01 Score: 1
GRMZM2G165272_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.13789
HV_CEa0009N10f Hordeum vulgare seedling green leaf EST library HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEa0009N10f, mRNA sequence /clone=HV_CEa0009N10f /gb=BF264590
Hv.15777
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf178m14, mRNA sequence /gb=AK248436
Mtr.8663
Medicago truncatula clone MTYFL_FM_FN_FO1G-M-13 unknown mRNA /cds=p(142,1221) /gb=BT053195
Os.11941
Oryza sativa Japonica Group cDNA clone:002-108-F03, full insert sequence /gb=AK106545
Os.27716
Oryza sativa (japonica cultivar-group) Os08g0546800 (Os08g0546800) mRNA, complete cds /cds=p(6,1856) /gb=NM_001068958
Os.50642
Oryza sativa (japonica cultivar-group) heat shock factor RHSF1 mRNA, complete cds /cds=p(122,988) /gb=AY344483
Sbi.1889
HS1_4_A05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_4_A05_A012 5', mRNA sequence /clone=HS1_4_A05_A012 /clone_end=5' /gb=CD204212 /gi=30933027

Domain Architecture

HSF_DNA-bind PF00447 GRMZM2G005684_P01
DomainStartEndBit scoreE-value
HSF_DNA-bind43257151.33e-42

Sequences