Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G006745_P02

Identification

Species:
Zea mays
Gene model
GRMZM2G006745_P02
Family
AP2-EREBP
3D structure (top 5)
1GCC
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478447 Score: 1

Arabidopsis thaliana

AT3G11020.1 Score: 1
AT5G05410.1 Score: 1

Zea mays

GRMZM2G006745_P01 Score: 1
GRMZM2G006745_P02 Score: 1

Zea mays

GRMZM2G006745_P01 Score: 1
GRMZM2G006745_P03 Score: 1
GRMZM2G006745_P04 Score: 1
GRMZM2G006745_P06 Score: 1
GRMZM2G006745_P02 Score: 0.971

Oryza sativa subsp. japonica

LOC_Os05g27930.1 Score: 1
LOC_Os05g27930.2 Score: 1
LOC_Os05g27930.3 Score: 1
LOC_Os05g27930.4 Score: 1

Populus trichocarpa

564082 Score: 1

Zea mays

GRMZM2G006745_P01 Score: 1
GRMZM2G006745_P02 Score: 0.961

Sorghum bicolor

149663 Score: 1

Expression data

Expressed Sequence Tags

At.234
Arabidopsis thaliana At3g11020 mRNA for putative DREB2B transcription factor, complete cds, clone: RAFL16-93-F04 /cds=p(229,1221) /gb=AK117363
Hv.21132
Hordeum vulgare subsp. vulgare dehydration responsive element binding protein 1 (DREB1) mRNA, complete cds /cds=p(256,1092) /gb=DQ012941
Hv.8737
Hordeum vulgare AP2 domain protein (DRF2) mRNA, complete cds /cds=p(125,1075) /gb=AF521302
Mtr.20682
METBG95TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY478675
Os.32760
Oryza sativa Japonica Group cDNA clone:J033107M13, full insert sequence /gb=AK121956
Sbi.11649
PH1_18_F11.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor cDNA clone PH1_18_F11_A002 5', mRNA sequence /clone=PH1_18_F11_A002 /clone_end=5' /gb=CF428910 /gi=34441611
Sbi.13827
Sorghum bicolor DRE-binding protein 2 (DREB2) mRNA, complete cds /cds=p(504,1292) /gb=DQ403725
Sbi.18225
DG1_114_A10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA sequence /gb=BE355510

Domain Architecture

AP2 PF00847 GRMZM2G006745_P02
DomainStartEndBit scoreE-value
AP213118278.32.8e-20

Sequences