Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G008654_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G008654_P01
Family
SET
3D structure (top 5)
2R3A 1H3I 3F9X 2RFI 1ML9
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G04380.1 Score: 1
AT3G04380.2 Score: 1

Zea mays

GRMZM2G000408_P01 Score: 1
GRMZM2G008654_P01 Score: 1
GRMZM2G061059_P01 Score: 1
GRMZM2G138115_P01 Score: 1

Zea mays

GRMZM2G000408_P01 Score: 1
GRMZM2G008654_P01 Score: 1
GRMZM2G061059_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g40770.1 Score: 1
LOC_Os02g40770.2 Score: 1

Physcomitrella patens

3159 Score: 1

Zea mays

GRMZM2G000408_P01 Score: 1
GRMZM2G008654_P01 Score: 1
GRMZM2G061059_P01 Score: 1

Sorghum bicolor

5004374 Score: 1

Zea mays

GRMZM2G000408_P01 Score: 1
GRMZM2G008654_P01 Score: 1
GRMZM2G061059_P01 Score: 1

Selaginella moellendorffii

85776 Score: 1

Zea mays

GRMZM2G000408_P01 Score: 1
GRMZM2G008654_P01 Score: 1
GRMZM2G061059_P01 Score: 1

Expression data

Expressed Sequence Tags

At.10585
Arabidopsis thaliana SUVR1 (Arabidopsis homolog of SU(VAR)3-9 1); histone-lysine N-methyltransferase/ zinc ion binding (SUVR1) mRNA, complete cds /cds=p(102,2306) /gb=NM_100286
At.26569
Arabidopsis thaliana mRNA for SET domain protein SUVR2, complete cds, clone: RAFL26-05-B10 /cds=p(244,2397) /gb=AK230468
Os.53850
Oryza sativa Japonica Group cDNA clone:J023086A12, full insert sequence /cds=p(195,2420) /gb=AK100391
Ppa.19113
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_3159) mRNA, partial cds /cds=p(1,966) /gb=XM_001785757
Vvi.20659
WIN0534.C21_N01 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0534_N01 3', mRNA sequence /clone=WIN0534_N01 /clone_end=3' /gb=EC945442

Domain Architecture

WIYLD PF10440 GRMZM2G008654_P01
DomainStartEndBit scoreE-value
WIYLD16567.45.4e-17
SET331485126.68.1e-35

Sequences