Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G016901_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G016901_P01
Family
SET
3D structure (top 5)
2R3A 3F9X 2RFI 1ML9 3H6L
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_87.14 Score: 1

Zea mays

GRMZM2G061709_P01 Score: 1
GRMZM2G016901_P01 Score: 0.995

Zea mays

GRMZM2G016901_P01 Score: 1
GRMZM2G061709_P01 Score: 1
GRMZM2G138115_P01 Score: 1

Vitis vinifera

GSVIVP00020336001 Score: 1
GSVIVP00028515001 Score: 1

Expression data

Expressed Sequence Tags

At.27206
Arabidopsis thaliana Su(VAR)3-9-related protein 4 (SUVR4) mRNA, complete cds /cds=p(216,1682) /gb=AF408062
Ppa.19113
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_3159) mRNA, partial cds /cds=p(1,966) /gb=XM_001785757
Vvi.20659
WIN0534.C21_N01 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0534_N01 3', mRNA sequence /clone=WIN0534_N01 /clone_end=3' /gb=EC945442

Domain Architecture

WIYLD PF10440 GRMZM2G016901_P01
DomainStartEndBit scoreE-value
WIYLD16265.71.7e-16
Pre-SET39254113.33.4e-05
SET543689116.49.4e-32

Sequences