Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G018487_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G018487_P01
Family
WRKY
3D structure (top 5)
1WJ2 2AYD
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G018487_P01 Score: 1
GRMZM2G018487_P02 Score: 1
GRMZM2G157294_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g53050.1 Score: 1

Sorghum bicolor

5048172 Score: 1

Zea mays

GRMZM2G018487_P01 Score: 1
GRMZM2G018487_P02 Score: 1
GRMZM2G157294_P01 Score: 1

Expression data

Expressed Sequence Tags

At.14727
Arabidopsis thaliana WRKY21 (WRKY DNA-binding protein 21); transcription factor (WRKY21) mRNA, complete cds /cds=p(416,1558) /gb=NM_128611
At.20946
Arabidopsis thaliana WRKY7 (WRKY DNA-binding protein 7); transcription factor (WRKY7) mRNA, complete cds /cds=p(165,1226) /gb=NM_118557
At.24883
Arabidopsis thaliana WRKY15 (WRKY DNA-binding protein 15); transcription factor (WRKY15) mRNA, complete cds /cds=p(66,1019) /gb=NM_127896
Hv.17161
Hordeum vulgare subsp. vulgare WRKY transcription factor 9 (WRKY9) mRNA, partial cds /cds=p(1,1017) /gb=DQ840408
Os.59130
Oryza sativa Japonica Group cDNA clone:J033100L17, full insert sequence /cds=p(177,1340) /gb=AK121838
Pba.7916
WS02519.B21_O13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_O13 3', mRNA sequence /clone=WS02519_O13 /clone_end=3' /gb=DT482469
Pth.16470
WS02519.B21_O13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_O13 3', mRNA sequence /clone=WS02519_O13 /clone_end=3' /gb=DT482469
Pth.78
Populus trichocarpa clone WS0128_M02 unknown mRNA /cds=p(131,1135) /gb=EF148210
Ptp.9454
A002P11.3pR Hybrid aspen plasmid library Populus tremula x Populus tremuloides cDNA clone A002P11 3', mRNA sequence /clone=A002P11 /clone_end=3' /gb=CK087282
Sbi.10763
DG1_69_G12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA sequence /gb=BE361091
Vvi.11310
WIN1124.C21_M01 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1124_M01 3', mRNA sequence /clone=WIN1124_M01 /clone_end=3' /gb=EC985407
Vvi.18970
WIN027.TB24.1_N08 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN027_N08 3', mRNA sequence /clone=WIN027_N08 /clone_end=3' /gb=EC925126

Domain Architecture

Plant_zn_clust PF10533 GRMZM2G018487_P01
DomainStartEndBit scoreE-value
Plant_zn_clust28532978.42.6e-20
WRKY331391142.31.5e-39

Sequences