Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G019542_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G019542_P01
Family
TRAF
3D structure (top 5)
2Z8H 2IHC 3B84 2PPI 2Q81
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G017404_P01 Score: 1
GRMZM2G019542_P01 Score: 1
GRMZM2G095510_P01 Score: 0.904
GRMZM2G171951_P01 Score: 0.904

Micromonas sp. RCC299

61672 Score: 1

Zea mays

GRMZM2G017404_P01 Score: 1
GRMZM2G019542_P01 Score: 1
GRMZM2G095510_P01 Score: 0.942
GRMZM2G171951_P01 Score: 0.942

Physcomitrella patens

134565 Score: 1
30287 Score: 1

Zea mays

GRMZM2G017404_P01 Score: 1
GRMZM2G019542_P01 Score: 1
GRMZM2G095510_P01 Score: 1
GRMZM2G171951_P01 Score: 1

Zea mays

GRMZM2G017404_P01 Score: 1
GRMZM2G019542_P01 Score: 1
GRMZM2G095510_P01 Score: 0.912
GRMZM2G171951_P01 Score: 0.912

Zea mays

GRMZM2G017404_P01 Score: 1
GRMZM2G019542_P01 Score: 1

Vitis vinifera

GSVIVP00019759001 Score: 1

Expression data

Expressed Sequence Tags

At.33136
Arabidopsis thaliana mRNA for hypothetical protein, clone: RAFL19-17-K21 /gb=AK229574
Hv.20524
HVSMEa0002P17f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0002P17f, mRNA sequence /clone=HVSMEa0002P17f /gb=BF623606
Mtr.17764
MEUA607TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=GE343857
Os.18167
Oryza sativa Japonica Group cDNA clone:J023048I08, full insert sequence /cds=p(79,2499) /gb=AK072340

Domain Architecture

BTB PF00651 GRMZM2G019542_P01
DomainStartEndBit scoreE-value
BTB5216645.12.8e-10

Sequences