Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G026354_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G026354_P01
Family
Orphans
3D structure (top 5)
3D36 2Q8G 2BTZ 1YSR 2C2A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G04580.1 Score: 1
AT3G04580.2 Score: 1

Carica papaya

evm.TU.supercontig_2388.2 Score: 1

Coccomyxa sp. C-169

24645 Score: 1

Zea mays

GRMZM2G089010_P01 Score: 1.101
GRMZM2G089010_P02 Score: 1.101
GRMZM2G089010_P03 Score: 1
GRMZM2G026354_P01 Score: 0.94

Oryza sativa subsp. japonica

LOC_Os04g08740.1 Score: 1
LOC_Os04g08740.2 Score: 1

Populus trichocarpa

828672 Score: 1
832836 Score: 1

Zea mays

GRMZM2G026354_P01 Score: 1
GRMZM2G089010_P02 Score: 1

Sorghum bicolor

4887127 Score: 1

Vitis vinifera

GSVIVP00002180001 Score: 1

Expression data

Expressed Sequence Tags

At.21286
Arabidopsis thaliana EIN4 (ETHYLENE INSENSITIVE 4); receptor (EIN4) mRNA, complete cds /cds=p(511,2811) /gb=NM_111329
Hv.15578
HVSMEc0019G17f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0019G17f, mRNA sequence /clone=HVSMEc0019G17f /gb=BF620310
Os.14934
Oryza sativa Japonica Group cDNA clone:J023048C17, full insert sequence /cds=p(608,2899) /gb=AK111748
Os.29967
Oryza sativa (indica cultivar-group) putative ethylene receptor (ETR4) mRNA, complete cds /cds=p(30,2363) /gb=AY434734
Os.57106
Oryza sativa (indica cultivar-group) putative ethylene receptor (ETR3) mRNA, complete cds /cds=p(309,2819) /gb=AY434735
Os.81178
OSJNEb10M06.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA clone OSJNEb10M06 3', mRNA sequence /clone=OSJNEb10M06 /clone_end=3' /gb=CB647720
Sbi.19647
RTHAIR1_33_C11.g1_A002 Sorghum bicolor BTx623 Root hair Sorghum bicolor cDNA clone RTHAIR1_33_C11_A002 5', mRNA sequence /clone=RTHAIR1_33_C11_A002 /clone_end=5' /gb=EH409080

Domain Architecture

GAF PF01590 GRMZM2G026354_P01
DomainStartEndBit scoreE-value
GAF19534457.26.4e-14
HisKA38044522.10.0017
Response_reg64776167.26.3e-17

Sequences