Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G026742_P03

Identification

Species:
Zea mays
Gene model
GRMZM2G026742_P03
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Cyanidioschyzon merolae

CML277C Score: 1

Zea mays

GRMZM2G118485_P01 Score: 1
GRMZM2G118485_P02 Score: 1
GRMZM2G178310_P01 Score: 1
GRMZM2G178310_P02 Score: 1
GRMZM2G026742_P01 Score: 0.946
GRMZM2G026742_P02 Score: 0.946
GRMZM2G026742_P03 Score: 0.946
GRMZM2G026742_P04 Score: 0.946

Coccomyxa sp. C-169

75510 Score: 1

Zea mays

GRMZM2G118485_P01 Score: 1
GRMZM2G118485_P02 Score: 1
GRMZM2G178310_P01 Score: 1
GRMZM2G178310_P02 Score: 1
GRMZM2G026742_P01 Score: 0.94
GRMZM2G026742_P02 Score: 0.94
GRMZM2G026742_P03 Score: 0.94
GRMZM2G026742_P04 Score: 0.94

Micromonas sp. RCC299

108997 Score: 1

Zea mays

GRMZM2G026742_P01 Score: 1
GRMZM2G026742_P02 Score: 1
GRMZM2G026742_P03 Score: 1
GRMZM2G026742_P04 Score: 1

Zea mays

GRMZM2G026742_P01 Score: 1
GRMZM2G026742_P02 Score: 1
GRMZM2G026742_P03 Score: 1
GRMZM2G026742_P04 Score: 1
GRMZM2G118485_P02 Score: 1
GRMZM2G178310_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g12370.1 Score: 1
LOC_Os03g12370.3 Score: 1
LOC_Os03g12370.2 Score: 0.97

Expression data

Expressed Sequence Tags

At.32971
Arabidopsis thaliana HSF1 (ARABIDOPSIS HEAT SHOCK FACTOR 1); DNA binding / transcription factor (HSF1) mRNA, complete cds /cds=p(1,1488) /gb=NM_117884
Mtr.22152
NF106H11DT1F1094 Drought Medicago truncatula cDNA clone NF106H11DT 5', mRNA sequence /clone=NF106H11DT /clone_end=5' /gb=BF636270
Os.40020
Oryza sativa Japonica Group cDNA clone:J023131M03, full insert sequence /cds=p(167,1399) /gb=AK072571
Pba.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Ppa.23110
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_108327) mRNA, complete cds /cds=p(1,1224) /gb=XM_001778961
Pth.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055

Domain Architecture

HSF_DNA-bind PF00447 GRMZM2G026742_P03
DomainStartEndBit scoreE-value
HSF_DNA-bind492262382.4e-68

Sequences