Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G030795_P02

Identification

Species:
Zea mays
Gene model
GRMZM2G030795_P02
Family
C3H
3D structure (top 5)
1M9O 3D2Q 2E5S 2RPP 3D2N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

890808 Score: 1

Zea mays

GRMZM2G030795_P02 Score: 1
GRMZM2G030795_P04 Score: 1
GRMZM2G030795_P01 Score: 0.982
GRMZM2G030795_P03 Score: 0.982

Arabidopsis thaliana

AT1G32360.1 Score: 1

Zea mays

GRMZM2G030795_P02 Score: 1
GRMZM2G030795_P04 Score: 1
GRMZM2G030795_P01 Score: 0.982
GRMZM2G030795_P03 Score: 0.982

Carica papaya

evm.TU.supercontig_90.53 Score: 1

Zea mays

GRMZM2G030795_P01 Score: 1
GRMZM2G030795_P03 Score: 1
GRMZM2G030795_P02 Score: 0.963
GRMZM2G030795_P04 Score: 0.963

Zea mays

GRMZM2G030795_P02 Score: 1
GRMZM2G030795_P04 Score: 1
GRMZM2G030795_P01 Score: 0.958
GRMZM2G030795_P03 Score: 0.958

Oryza sativa subsp. japonica

LOC_Os08g06330.1 Score: 1

Populus trichocarpa

554027 Score: 1

Zea mays

GRMZM2G030795_P02 Score: 1
GRMZM2G030795_P04 Score: 1
GRMZM2G030795_P01 Score: 0.978
GRMZM2G030795_P03 Score: 0.978

Sorghum bicolor

5007510 Score: 1

Zea mays

GRMZM2G030795_P01 Score: 1
GRMZM2G030795_P03 Score: 1
GRMZM2G030795_P02 Score: 0.955
GRMZM2G030795_P04 Score: 0.955

Selaginella moellendorffii

413367 Score: 1

Zea mays

GRMZM2G030795_P02 Score: 1
GRMZM2G030795_P04 Score: 1
GRMZM2G030795_P01 Score: 0.99
GRMZM2G030795_P03 Score: 0.99

Zea mays

GRMZM2G030795_P01 Score: 1
GRMZM2G030795_P02 Score: 1
GRMZM2G030795_P03 Score: 1
GRMZM2G030795_P04 Score: 1

Vitis vinifera

GSVIVP00013976001 Score: 1
GSVIVP00015742001 Score: 1

Expression data

Expressed Sequence Tags

Hv.14126
HVSMEl0019D05f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEl0019D05f, mRNA sequence /clone=HVSMEl0019D05f /gb=BI950170
Os.48416
Oryza sativa (japonica cultivar-group) Os08g0159800 (Os08g0159800) mRNA, complete cds /cds=p(1,1104) /gb=NM_001067579
Pba.9203
WS02549.C21_B18 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02549_B18 3', mRNA sequence /clone=WS02549_B18 /clone_end=3' /gb=DT491895
Pth.9203
WS02549.C21_B18 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02549_B18 3', mRNA sequence /clone=WS02549_B18 /clone_end=3' /gb=DT491895
Sbi.11578
WS1_98_B06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA sequence /gb=BE593461
Vvi.10057
WIN055.C21_E17 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN055_E17 3', mRNA sequence /clone=WIN055_E17 /clone_end=3' /gb=EC938008

Domain Architecture

zf-CCCH PF00642 GRMZM2G030795_P02
DomainStartEndBit scoreE-value
zf-CCCH9411937.26.6e-08
zf-CCCH17520125.90.00016
zf-CCCH23826449.51.3e-11

Sequences