Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G033962_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G033962_P01
Family
Pseudo ARR-B
3D structure (top 5)
1K68 1MB3 2QXY 2PL1 1MVO
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os07g49460.1 Score: 1
LOC_Os07g49460.2 Score: 1
LOC_Os07g49460.3 Score: 1
LOC_Os07g49460.4 Score: 1

Physcomitrella patens

165025 Score: 1

Sorghum bicolor

128348 Score: 1

Expression data

Expressed Sequence Tags

Hv.21000
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf75k13, mRNA sequence /gb=AK250331
Hv.21018
HVSMEk0007I08f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0007I08f, mRNA sequence /clone=HVSMEk0007I08f /gb=BG415702
Os.58539
Oryza sativa Japonica Group cDNA clone:J023077E22, full insert sequence /gb=AK121136
Os.59215
Oryza sativa Japonica Group cDNA clone:J013051N02, full insert sequence /gb=AK066112
Pba.9585
WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373
Ppa.20190
Physcomitrella patens subsp. patens circadian clock protein PRR3 (PpPRR3) mRNA, complete cds /cds=p(1,2325) /gb=XM_001784564
Pth.16941
WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373

Domain Architecture

Response_reg PF00072 GRMZM2G033962_P01
DomainStartEndBit scoreE-value
Response_reg712753.29.7e-13
CCT60464881.14e-21

Sequences

protein sequence
transcript sequence