Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G036837_P02

Identification

Species:
Zea mays
Gene model
GRMZM2G036837_P02
Family
C3H
3D structure (top 5)
1M9O 2D9N 2E5S 2CQE 2RHK
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

904260 Score: 1

Zea mays

GRMZM2G036837_P01 Score: 1
GRMZM2G036837_P02 Score: 1
GRMZM2G036837_P03 Score: 1

Arabidopsis thaliana

AT2G47850.1 Score: 1
AT2G47850.3 Score: 1

Zea mays

GRMZM2G036837_P01 Score: 1
GRMZM2G036837_P02 Score: 1
GRMZM2G036837_P03 Score: 1

Carica papaya

evm.TU.supercontig_9.180 Score: 1

Zea mays

GRMZM2G036837_P01 Score: 1
GRMZM2G036837_P02 Score: 1
GRMZM2G036837_P03 Score: 1
GRMZM2G100794_P01 Score: 1

Zea mays

GRMZM2G036837_P01 Score: 1
GRMZM2G036837_P02 Score: 1
GRMZM2G036837_P03 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g15460.1 Score: 1
LOC_Os01g15460.2 Score: 1

Sorghum bicolor

4797888 Score: 1

Zea mays

GRMZM2G036837_P01 Score: 1
GRMZM2G036837_P02 Score: 1
GRMZM2G036837_P03 Score: 1

Zea mays

GRMZM2G036837_P01 Score: 1
GRMZM2G036837_P02 Score: 1
GRMZM2G036837_P03 Score: 1

Vitis vinifera

GSVIVP00023577001 Score: 1

Expression data

Expressed Sequence Tags

At.21006
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT2G47850) mRNA, complete cds /cds=p(281,1687) /gb=NM_130352
Os.9029
Oryza sativa Japonica Group cDNA clone:J033073E09, full insert sequence /cds=p(298,1698) /gb=AK073920
Os.9931
Oryza sativa Japonica Group cDNA clone:J013116H24, full insert sequence /cds=p(333,1727) /gb=AK111633
Vvi.8684
WIN1149.C21_O06 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1149_O06 3', mRNA sequence /clone=WIN1149_O06 /clone_end=3' /gb=EC993939

Domain Architecture

zf-CCCH PF00642 GRMZM2G036837_P02
DomainStartEndBit scoreE-value
zf-CCCH628841.53.2e-09
zf-CCCH11113743.49.2e-10
zf-CCCH15618244.93.1e-10
zf-CCCH30833445.81.7e-10
zf-CCCH35438038.52.7e-08

Sequences