Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G038691_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G038691_P01
Family
TRAF
3D structure (top 5)
2Z8H 2PPI 2Q81 1BUO 2VKP
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_184.4 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g31100.1 Score: 1

Sorghum bicolor

5061748 Score: 1

Expression data

Expressed Sequence Tags

At.21011
Arabidopsis thaliana unknown protein (At2g46260) mRNA, complete cds /cds=p(144,1829) /gb=AY046011
At.25033
Arabidopsis thaliana ATPOB1 (Arabidopsis thaliana POZ/BTB containing-protein 1); protein binding (ATPOB1) mRNA, complete cds /cds=p(126,1811) /gb=NM_180402
At.54069
Arabidopsis thaliana BTB/POZ domain-containing protein (AT4G01160) mRNA, complete cds /cds=p(1,1518) /gb=NM_116346
Hv.22765
Hordeum vulgare subsp. vulgare GAMYB-binding protein mRNA, complete cds /cds=p(352,2097) /gb=AY587552
Hv.24935
HVSMEl0024G22f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEl0024G22f, mRNA sequence /clone=HVSMEl0024G22f /gb=BI951105
Mtr.5276
EST510197 HOGA Medicago truncatula cDNA clone pHOGA-23M17 5' end, mRNA sequence /clone=pHOGA-23M17 /clone_end=5' /gb=BG648578
Os.15246
Oryza sativa Japonica Group cDNA clone:J023123D22, full insert sequence /cds=p(99,1775) /gb=AK100835
Os.5906
Oryza sativa Japonica Group cDNA clone:J013066L01, full insert sequence /cds=p(266,1876) /gb=AK066411
Pba.2350
WS0194.B21_F17 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0194_F17 3', mRNA sequence /clone=WS0194_F17 /clone_end=3' /gb=CV231375
Pba.2860
WS02521.B21_K05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02521_K05 3', mRNA sequence /clone=WS02521_K05 /clone_end=3' /gb=DT483091
Ppa.21109
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_122867) mRNA, complete cds /cds=p(1,1629) /gb=XM_001760378
Ppa.22099
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_189922) mRNA, complete cds /cds=p(419,2038) /gb=XM_001771483
Pth.2350
WS0194.B21_F17 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0194_F17 3', mRNA sequence /clone=WS0194_F17 /clone_end=3' /gb=CV231375
Pth.2860
WS02521.B21_K05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02521_K05 3', mRNA sequence /clone=WS02521_K05 /clone_end=3' /gb=DT483091
Pth.7852
WS02522.B21_B18 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02522_B18 3', mRNA sequence /clone=WS02522_B18 /clone_end=3' /gb=DT483261
Sbi.11152
IP1_30_A06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA, mRNA sequence /gb=BI098255
Sbi.11938
IP1_30_A06.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA, mRNA sequence /gb=BI097946
Sbi.12020
WS1_104_F10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA sequence /gb=BE593976
Vvi.3808
S1G02684 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G02684, mRNA sequence /clone=S1G02684 /gb=EE076113
Vvi.9349
S1G01764 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G01764, mRNA sequence /clone=S1G01764 /gb=EE075626

Domain Architecture

BTB PF00651 GRMZM2G038691_P01
DomainStartEndBit scoreE-value
BTB12222541.33.9e-09

Sequences