Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G039889_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G039889_P01
Family
C3H
3D structure (top 5)
1M9O 2E5S 2CQE 2D9N 2RHK
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

891632 Score: 1

Zea mays

GRMZM2G039889_P03 Score: 1.064
GRMZM2G039889_P01 Score: 1.011
GRMZM2G039889_P04 Score: 1
GRMZM2G039889_P07 Score: 1

Arabidopsis thaliana

AT1G48195.1 Score: 1

Zea mays

GRMZM2G039889_P03 Score: 1.063
GRMZM2G039889_P01 Score: 1.011
GRMZM2G039889_P04 Score: 1
GRMZM2G039889_P07 Score: 1

Carica papaya

evm.TU.supercontig_118.21 Score: 1

Zea mays

GRMZM2G039889_P02 Score: 1.073
GRMZM2G039889_P03 Score: 1.057
GRMZM2G039889_P01 Score: 1

Chlamydomonas reinhardtii

390321 Score: 1

Zea mays

GRMZM2G039889_P03 Score: 1.064
GRMZM2G039889_P01 Score: 1.011
GRMZM2G039889_P04 Score: 1
GRMZM2G039889_P07 Score: 1

Expression data

Expressed Sequence Tags

Hv.4165
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf129b04, mRNA sequence /gb=AK251631
Os.1486
Oryza sativa Japonica Group cDNA clone:002-103-E06, full insert sequence /cds=p(96,1481) /gb=AK112116

Domain Architecture

zf-CCCH PF00642 GRMZM2G039889_P01
DomainStartEndBit scoreE-value
zf-CCCH11813.20.028
zf-CCCH598541.53.2e-09
zf-CCCH11113739.21.7e-08

Sequences