Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G046158_P02

Identification

Species:
Zea mays
Gene model
GRMZM2G046158_P02
Family
TUB
3D structure (top 5)
2FIM 3C5N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.18294
Arabidopsis thaliana AtTLP6 (TUBBY LIKE PROTEIN 6); phosphoric diester hydrolase/ transcription factor (AtTLP6) mRNA, complete cds /cds=p(273,1514) /gb=NM_103621
At.21504
Arabidopsis thaliana AtTLP2 (TUBBY LIKE PROTEIN 2); phosphoric diester hydrolase/ transcription factor (AtTLP2) mRNA, complete cds /cds=p(479,1663) /gb=NM_001036292
Mtr.13296
EST648312 KV3 Medicago truncatula cDNA clone KV3-49N18, mRNA sequence /clone=KV3-49N18 /gb=CB891343
Mtr.1961
EST647354 HOGA Medicago truncatula cDNA clone HOGA-31J3, mRNA sequence /clone=HOGA-31J3 /gb=CB894562
Os.51217
Oryza sativa Japonica Group cDNA clone:J033074D16, full insert sequence /gb=AK101936
Pba.10911
WS01225.BR.1_P03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01225_P03 5', mRNA sequence /clone=WS01225_P03 /clone_end=5' /gb=DT472236
Pba.4084
WS02528.BR_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02528_C13 5', mRNA sequence /clone=WS02528_C13 /clone_end=5' /gb=DT480179
Ppa.17533
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_190792) mRNA, complete cds /cds=p(1,1287) /gb=XM_001772550
Ppa.23639
CBAX6060.fwd CBAX Physcomitrella patens subsp. patens Gransden - dessicated (L) Physcomitrella patens subsp. patens cDNA clone CBAX6060 5', mRNA sequence /clone=CBAX6060 /clone_end=5' /gb=FC450251
Ppa.6953
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_221905) mRNA, complete cds /cds=p(1,1278) /gb=XM_001777454
Pth.4669
Populus trichocarpa clone WS0115_J02 unknown mRNA /cds=p(226,1497) /gb=EF146106

Domain Architecture

F-box PF00646 GRMZM2G046158_P02
DomainStartEndBit scoreE-value
F-box7412927.36.4e-05
Tub140263-44.83.4e-07

Sequences