Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G046342_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G046342_P01
Family
TRAF
3D structure (top 5)
2YY9 2IF5 2Z8H 2IHC 3B84
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

892582 Score: 1

Zea mays

GRMZM2G046342_P01 Score: 1
GRMZM2G130505_P01 Score: 1

Arabidopsis thaliana

AT1G55760.1 Score: 1

Zea mays

GRMZM2G046342_P01 Score: 1
GRMZM2G130505_P01 Score: 1

Carica papaya

evm.TU.supercontig_12.99 Score: 1

Zea mays

GRMZM2G046342_P01 Score: 1
GRMZM2G130505_P01 Score: 1

Zea mays

GRMZM2G046342_P01 Score: 1
GRMZM2G130505_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g38700.1 Score: 1

Populus trichocarpa

708145 Score: 1

Zea mays

GRMZM2G046342_P01 Score: 1
GRMZM2G130505_P01 Score: 1

Sorghum bicolor

4891836 Score: 1

Zea mays

GRMZM2G046342_P01 Score: 1
GRMZM2G130505_P01 Score: 1

Zea mays

GRMZM2G046342_P01 Score: 1
GRMZM2G130505_P01 Score: 1

Vitis vinifera

GSVIVP00033478001 Score: 1

Expression data

Expressed Sequence Tags

At.49979
Arabidopsis thaliana BTB/POZ domain-containing protein (AT1G55760) mRNA, complete cds /cds=p(548,1537) /gb=NM_104452
Hv.30431
HVSMEf0019M18f2 Hordeum vulgare seedling root (etiolated unstressed) cDNA library HVSMEf (HVcDNA0007)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0020K06r, mRNA sequence /clone=HV__Ea0020K06r /gb=GH216214
Mtr.5386
EST590399 KV2 Medicago truncatula cDNA clone pKV2-53K15, mRNA sequence /clone=pKV2-53K15 /gb=BM779823
Os.33471
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111L14, full insert sequence /gb=CT828468
Pth.15431
WS02515.B21_N03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02515_N03 3', mRNA sequence /clone=WS02515_N03 /clone_end=3' /gb=CV242708

Domain Architecture

BTB PF00651 GRMZM2G046342_P01
DomainStartEndBit scoreE-value
BTB15526485.61.7e-22

Sequences