Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G046816_P02

Identification

Species:
Zea mays
Gene model
GRMZM2G046816_P02
Family
TUB
3D structure (top 5)
2FIM 3C5N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Selaginella moellendorffii

91333 Score: 1

Expression data

Expressed Sequence Tags

At.17482
Arabidopsis thaliana AtTLP1 (TUBBY LIKE PROTEIN 1); phosphoric diester hydrolase/ transcription factor (AtTLP1) mRNA, complete cds /cds=p(211,1578) /gb=NM_179563
At.23717
Arabidopsis thaliana AtTLP10 (TUBBY LIKE PROTEIN 10); phosphoric diester hydrolase/ transcription factor (AtTLP10) mRNA, complete cds /cds=p(578,1915) /gb=NM_102338
Hv.11650
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf148o16, mRNA sequence /gb=AK252121
Hv.8578
HVSMEf0017B03f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0017B03f, mRNA sequence /clone=HVSMEf0017B03f /gb=BF258920
Mtr.3181
AC3425 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617437
Os.12718
Oryza sativa Japonica Group cDNA clone:J033089L13, full insert sequence /gb=AK102298
Os.15216
Oryza sativa Japonica Group cDNA clone:J033133A18, full insert sequence /cds=p(348,1685) /gb=AK103583
Os.17428
Oryza sativa Japonica Group cDNA clone:J023042K06, full insert sequence /cds=p(797,1750) /gb=AK070139
Os.18696
Oryza sativa Japonica Group cDNA clone:J033087L15, full insert sequence /gb=AK102221
Os.19114
Oryza sativa Japonica Group cDNA clone:J013023N16, full insert sequence /gb=AK098928
Os.27120
Oryza sativa Japonica Group cDNA clone:J023001B21, full insert sequence /gb=AK120706
Os.51217
Oryza sativa Japonica Group cDNA clone:J033074D16, full insert sequence /gb=AK101936
Pba.2529
WS02544.B21_N09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02544_N09 3', mRNA sequence /clone=WS02544_N09 /clone_end=3' /gb=DT490389
Pba.4669
WS0128.B21.1_M05 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0128_M05 3', mRNA sequence /clone=WS0128_M05 /clone_end=3' /gb=CV238946
Ppa.17533
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_190792) mRNA, complete cds /cds=p(1,1287) /gb=XM_001772550
Ppa.2119
CAYZ20400.fwd CAYZ Physcomitrella patens subsp. patens Villersexel - regular (L) Physcomitrella patens subsp. patens cDNA clone CAYZ20400 5', mRNA sequence /clone=CAYZ20400 /clone_end=5' /gb=FC394890
Pth.17601
WS02544.B21_N09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02544_N09 3', mRNA sequence /clone=WS02544_N09 /clone_end=3' /gb=DT490389
Pth.4669
Populus trichocarpa clone WS0115_J02 unknown mRNA /cds=p(226,1497) /gb=EF146106
Vvi.14168
CAB20001_Ia_Ra_F01 Cabernet Sauvignon Flower bloom - CAB2 Vitis vinifera cDNA clone CAB20001_Ia_Ra_F01 3', mRNA sequence /clone=CAB20001_Ia_Ra_F01 /clone_end=3' /gb=CF207573

Domain Architecture

Tub PF01167 GRMZM2G046816_P02
DomainStartEndBit scoreE-value
Tub1185119.88.8e-33

Sequences