Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G047031_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G047031_P01
Family
MYB
3D structure (top 5)
1GV2 2K9N 1H89 1H8A 2DIM
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

471078 Score: 1

Arabidopsis thaliana

AT1G09770.1 Score: 1

Chlorella sp. NC64A

33512 Score: 1

Carica papaya

evm.TU.supercontig_306.1 Score: 1

Chlamydomonas reinhardtii

377858 Score: 1

Coccomyxa sp. C-169

82458 Score: 1

Micromonas sp. RCC299

92928 Score: 1

Ostreococcus lucimarinus

31513 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g28090.1 Score: 1

Ostreococcus tauri

17156 Score: 1

Physcomitrella patens

228394 Score: 1

Populus trichocarpa

248127 Score: 1

Sorghum bicolor

4881210 Score: 1

Selaginella moellendorffii

179572 Score: 1
233652 Score: 0.954

Vitis vinifera

GSVIVP00002219001 Score: 1

Expression data

Expressed Sequence Tags

At.278
Arabidopsis thaliana ATCDC5 (ARABIDOPSIS THALIANA HOMOLOG OF CDC5); DNA binding / transcription factor (ATCDC5) mRNA, complete cds /cds=p(162,2696) /gb=NM_100849
Cre.2655
Chlamydomonas reinhardtii predicted protein (CHLREDRAFT_129649) mRNA, partial cds /cds=p(227,2659) /gb=XM_001693244
Hv.4257
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf169p09, mRNA sequence /gb=AK252801
Mtr.22299
EST648865 KV3 Medicago truncatula cDNA clone KV3-52B15, mRNA sequence /clone=KV3-52B15 /gb=CB891896
Mtr.9056
Medicago truncatula clone MTYFT1G-M-13 unknown mRNA /cds=p(44,877) /gb=BT053653
Os.10202
Oryza sativa Japonica Group cDNA clone:J033088F07, full insert sequence /gb=AK102248
Os.89847
86415rsicen_6482.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa (indica cultivar-group) cDNA 5', mRNA sequence /clone_end=5' /gb=CK077327
Pba.5266
WS02553.C21_I22 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_I22 3', mRNA sequence /clone=WS02553_I22 /clone_end=3' /gb=DT493153
Ppa.2492
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_228394) mRNA, complete cds /cds=p(283,2706) /gb=XM_001786014
Pth.5266
WS02553.C21_I22 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_I22 3', mRNA sequence /clone=WS02553_I22 /clone_end=3' /gb=DT493153
Sbi.9476
RHOH1_26_D03.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_26_D03_A002 5', mRNA sequence /clone=RHOH1_26_D03_A002 /clone_end=5' /gb=CN128036 /gi=45954542
Vvi.2776
S6B04032 Fruits 7-9 mm (VvS6) Vitis vinifera cDNA clone S6B04032, mRNA sequence /clone=S6B04032 /gb=EE089293
Vvi.8769
VVB161B10_410781 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB161B10 5, mRNA sequence /clone=VVB161B10 /clone_end=5' /gb=CD719437

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G047031_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding75351.62.9e-12
Myb_DNA-binding5910340.47.3e-09

Sequences