Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G047626_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G047626_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

347705 Score: 1
496112 Score: 1

Zea mays

GRMZM2G047626_P01 Score: 1
GRMZM2G130149_P01 Score: 1
GRMZM2G130149_P02 Score: 1
GRMZM2G130149_P04 Score: 0.98

Populus trichocarpa

203876 Score: 1
797707 Score: 1

Zea mays

GRMZM2G047626_P01 Score: 1
GRMZM2G048136_P01 Score: 1
GRMZM2G048136_P02 Score: 1
GRMZM2G130149_P01 Score: 1
GRMZM2G130149_P02 Score: 1
GRMZM2G130149_P04 Score: 0.98

Expression data

Expressed Sequence Tags

At.70065
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX842293
Hv.11858
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf39p08, mRNA sequence /gb=AK249546
Hv.14928
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf86c09, mRNA sequence /gb=AK250773
Os.10174
CT850100 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCRA113J08, mRNA sequence /clone=OSIGCRA113J08 /gb=CT850100
Os.11638
Oryza sativa Japonica Group cDNA clone:002-125-C06, full insert sequence /gb=AK107214
Sbi.8445
RHOH1_37_F10.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_37_F10_A002 5', mRNA sequence /clone=RHOH1_37_F10_A002 /clone_end=5' /gb=CN129844 /gi=45957896
Sbi.9143
GABR1_10_H03.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_10_H03_A002 5', mRNA sequence /clone=GABR1_10_H03_A002 /clone_end=5' /gb=CX613908 /gi=57812628

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G047626_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding105751.53.2e-12
Myb_DNA-binding6310854.93.2e-13

Sequences