Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G053311_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G053311_P01
Family
TUB
3D structure (top 5)
2FIM 3C5N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.27566
Arabidopsis thaliana putative tubby protein (At2g47900) mRNA, complete cds /cds=p(455,1675) /gb=AY074273
Hv.2908
HT01I23T HT Hordeum vulgare subsp. vulgare cDNA clone HT01I23 5-PRIME, mRNA sequence /clone=HT01I23 /clone_end=5' /gb=BQ466094
Mtr.4196
MTGland_A059_2007-06-22/MTGlandA059_C03_014_1 Medicago truncatula A17 glandular trichome Medicago truncatula cDNA, mRNA sequence /gb=EX529819
Os.21061
Oryza sativa (japonica cultivar-group) Os07g0667000 (Os07g0667000) mRNA, complete cds /cds=p(247,1467) /gb=NM_001067107
Os.61163
Oryza sativa Japonica Group cDNA clone:J033091L01, full insert sequence /cds=p(199,894) /gb=AK102370
Pth.11141
Populus trichocarpa clone WS01217_E07 unknown mRNA /cds=p(196,1374) /gb=EF146852

Domain Architecture

Tub PF01167 GRMZM2G053311_P01
DomainStartEndBit scoreE-value
Tub220393.66.7e-25

Sequences