Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G054795_P02

Identification

Species:
Zea mays
Gene model
GRMZM2G054795_P02
Family
C2C2-YABBY

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G045247_P02 Score: 1
GRMZM2G054795_P02 Score: 1
GRMZM2G045247_P01 Score: 0.982
GRMZM2G054795_P01 Score: 0.982

Populus trichocarpa

646464 Score: 1
744044 Score: 1

Zea mays

GRMZM2G045247_P02 Score: 1
GRMZM2G054795_P02 Score: 1
GRMZM2G079293_P01 Score: 1
GRMZM2G045247_P01 Score: 0.974
GRMZM2G054795_P01 Score: 0.974

Expression data

Expressed Sequence Tags

Os.54793
Oryza sativa Japonica Group OsYABBY4 mRNA for OsYABBY4 protein, complete cds /cds=p(472,1242) /gb=AB274016
Os.58966
Oryza sativa Japonica Group OsYABBY3 mRNA for OsYABBY3 protein, complete cds /cds=p(179,1120) /gb=AB274015
Os.6219
Oryza sativa Japonica Group OsYABBY5 mRNA for OsYABBY5 protein, complete cds /cds=p(142,942) /gb=AB274017
Pba.9149
WS02530.BR_M11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_M11 5', mRNA sequence /clone=WS02530_M11 /clone_end=5' /gb=DT481057
Pba.9156
WS02537.B21_F11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02537_F11 3', mRNA sequence /clone=WS02537_F11 /clone_end=3' /gb=DT488760
Pth.9149
WS02530.BR_M11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_M11 5', mRNA sequence /clone=WS02530_M11 /clone_end=5' /gb=DT481057
Pth.9156
WS02537.B21_F11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02537_F11 3', mRNA sequence /clone=WS02537_F11 /clone_end=3' /gb=DT488760
Ptp.11991
T008C02 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU830431
Ptp.4092
T101D01 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU837396
Vvi.15240
WIN087.C21_M12 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN087_M12 3', mRNA sequence /clone=WIN087_M12 /clone_end=3' /gb=EC964280

Domain Architecture

YABBY PF04690 GRMZM2G054795_P02
DomainStartEndBit scoreE-value
YABBY14211267.92.4e-77

Sequences