Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G054844_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G054844_P01
Family
C3H
3D structure (top 5)
1OY3 2FO1 1IKN 3B7B 1S70
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os05g03760.1 Score: 1

Vitis vinifera

GSVIVP00024088001 Score: 1

Expression data

Expressed Sequence Tags

Hv.11201
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf94p23, mRNA sequence /gb=AK250836
Hv.17011
HVSMEf0004I08f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0004I08f, mRNA sequence /clone=HVSMEf0004I08f /gb=BF254614
Hv.23976
HVSMEc0016D15f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0016D15f, mRNA sequence /clone=HVSMEc0016D15f /gb=BG310058
Mtr.12130
EST646389 HOGA Medicago truncatula cDNA clone HOGA-28M8, mRNA sequence /clone=HOGA-28M8 /gb=CB893597
Os.11774
Oryza sativa Japonica Group cDNA clone:001-202-E04, full insert sequence /cds=p(173,1978) /gb=AK105767
Sbi.10984
DG1_68_C09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA sequence /gb=BE360970
Sbi.17965
LG1_292_E12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA sequence /gb=AW564424
Vvi.19078
VV_PEd01a07.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241477

Domain Architecture

Ank PF00023 GRMZM2G054844_P01
DomainStartEndBit scoreE-value
Ank731053.711
Ank108143250.0003
zf-CCCH26128730.56.7e-06

Sequences