Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G060000_P02

Identification

Species:
Zea mays
Gene model
GRMZM2G060000_P02
Family
E2F-DP
3D structure (top 5)
1CF7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_35.31 Score: 1

Zea mays

GRMZM2G024688_P01 Score: 1
GRMZM2G060000_P01 Score: 1
GRMZM2G024688_P02 Score: 0.99
GRMZM2G060000_P02 Score: 0.99

Zea mays

GRMZM2G024688_P01 Score: 1
GRMZM2G060000_P01 Score: 1
GRMZM2G024688_P02 Score: 0.979
GRMZM2G060000_P02 Score: 0.979

Oryza sativa subsp. japonica

LOC_Os06g13670.1 Score: 1

Physcomitrella patens

231478 Score: 1
88654 Score: 1

Zea mays

GRMZM2G024688_P01 Score: 1
GRMZM2G060000_P01 Score: 1
GRMZM2G078867_P01 Score: 1
GRMZM2G024688_P02 Score: 0.99
GRMZM2G060000_P02 Score: 0.99

Populus trichocarpa

570039 Score: 1

Zea mays

GRMZM2G024688_P01 Score: 1
GRMZM2G060000_P01 Score: 1
GRMZM2G024688_P02 Score: 0.988
GRMZM2G060000_P02 Score: 0.988

Sorghum bicolor

4897135 Score: 1

Zea mays

GRMZM2G024688_P01 Score: 1
GRMZM2G060000_P01 Score: 1
GRMZM2G024688_P02 Score: 0.928
GRMZM2G060000_P02 Score: 0.928

Selaginella moellendorffii

421405 Score: 1

Zea mays

GRMZM2G024688_P01 Score: 1
GRMZM2G060000_P01 Score: 1
GRMZM2G024688_P02 Score: 0.991
GRMZM2G060000_P02 Score: 0.991

Zea mays

GRMZM2G024688_P01 Score: 1
GRMZM2G060000_P01 Score: 1
GRMZM2G024688_P02 Score: 0.989
GRMZM2G060000_P02 Score: 0.989

Vitis vinifera

GSVIVP00020855001 Score: 1

Expression data

Expressed Sequence Tags

Hv.28959
HDP12L12w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP12L12, mRNA sequence /clone=HDP12L12 /gb=EX590291
Os.47376
Oryza sativa Japonica Group cDNA clone:J013041C09, full insert sequence /gb=AK111537
Os.50197
Oryza sativa Japonica Group cDNA clone:002-186-D11, full insert sequence /gb=AK120032
Sbi.8440
RHOH1_46_B03.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_46_B03_A002 5', mRNA sequence /clone=RHOH1_46_B03_A002 /clone_end=5' /gb=CN131200 /gi=45960401

Domain Architecture

E2F_TDP PF02319 GRMZM2G060000_P02
DomainStartEndBit scoreE-value
E2F_TDP55120107.25.6e-29
E2F_TDP200281112.61.3e-30

Sequences