Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G060765_P05

Identification

Species:
Zea mays
Gene model
GRMZM2G060765_P05
Family
TRAF
3D structure (top 5)
2PPI 2Q81 1BUO 2VKP 1R29
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.24112
Arabidopsis thaliana ATBPM4 (BTB-POZ AND MATH DOMAIN 4); protein binding (ATBPM4) mRNA, complete cds /cds=p(2,1399) /gb=NM_111245
At.26159
Arabidopsis thaliana ATBPM5 (BTB-POZ AND MATH DOMAIN 5); protein binding (ATBPM5) mRNA, complete cds /cds=p(54,1286) /gb=NM_122109
At.43019
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZB06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX822662
Os.14695
Oryza sativa Japonica Group cDNA clone:J013151F13, full insert sequence /gb=AK120608
Os.54429
Oryza sativa Japonica Group cDNA clone:J013164G10, full insert sequence /cds=p(67,1362) /gb=AK068848
Pba.1049
WS0257.B21_N09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0257_N09 3', mRNA sequence /clone=WS0257_N09 /clone_end=3' /gb=CV245585
Pba.7841
WS02522.B21_J12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02522_J12 3', mRNA sequence /clone=WS02522_J12 /clone_end=3' /gb=DT483437
Ppa.2468
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_143618) mRNA, complete cds /cds=p(1,1191) /gb=XM_001776357
Ppa.4132
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_226178) mRNA, complete cds /cds=p(344,1549) /gb=XM_001782953
Ppa.666
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_217835) mRNA, complete cds /cds=p(380,1588) /gb=XM_001772196
Pth.1049
WS0257.B21_N09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0257_N09 3', mRNA sequence /clone=WS0257_N09 /clone_end=3' /gb=CV245585
Pth.15080
WS0256.B21_A15 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0256_A15 3', mRNA sequence /clone=WS0256_A15 /clone_end=3' /gb=CV244939
Pth.7841
WS02522.B21_J12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02522_J12 3', mRNA sequence /clone=WS02522_J12 /clone_end=3' /gb=DT483437
Sbi.6210
DG1_145_C08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA sequence /gb=BE356917
Vvi.10225
WIN057.C21_J07 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN057_J07 3', mRNA sequence /clone=WIN057_J07 /clone_end=3' /gb=EC938757

Domain Architecture

BTB PF00651 GRMZM2G060765_P05
DomainStartEndBit scoreE-value
BTB201491008.3e-27

Sequences