Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G060894_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G060894_P01
Family
LUG
3D structure (top 5)
1DFC 2PM9 3DM0 1QXM 2OIZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

491464 Score: 1

Arabidopsis thaliana

AT4G32551.1 Score: 1

Carica papaya

evm.TU.supercontig_91.26 Score: 1

Populus trichocarpa

778982 Score: 1
819573 Score: 1

Zea mays

GRMZM2G060894_P01 Score: 1
GRMZM2G062822_P03 Score: 1
GRMZM2G062822_P04 Score: 1

Sorghum bicolor

4879107 Score: 1

Selaginella moellendorffii

410492 Score: 1

Zea mays

GRMZM2G060894_P01 Score: 1
GRMZM2G079013_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.19772
HDP33O08w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP33O08, mRNA sequence /clone=HDP33O08 /gb=EX586571
Hv.20526
BES1824105o10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010O105 5-PRIME, mRNA sequence /clone=MPMGp2010O10105 /clone_end=5' /gb=CK123877
Mtr.11332
EST529899 GPOD Medicago truncatula cDNA clone pGPOD-7E3 5' end, mRNA sequence /clone=pGPOD-7E3 /clone_end=5' /gb=BI308489
Mtr.5100
EST305840 DSIR Medicago truncatula cDNA clone pDSIR-7C3, mRNA sequence /clone=pDSIR-7C3 /gb=AW267712
Os.23654
Oryza sativa Japonica Group cDNA clone:J023140I01, full insert sequence /gb=AK072687
Os.26114
Oryza sativa Japonica Group cDNA clone:J033027C19, full insert sequence /gb=AK101152
Os.79152
Oryza sativa (japonica cultivar-group) Os01g0607600 (Os01g0607600) mRNA, complete cds /cds=p(1,2235) /gb=NM_001050067
Os.97883
OSIIEb06L03.r OSIIEb Oryza sativa (indica cultivar-group) cDNA clone OSIIEb06L03 3', mRNA sequence /clone=OSIIEb06L03 /clone_end=3' /gb=CB630011
Pba.10622
WS02535.B21_N16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02535_N16 3', mRNA sequence /clone=WS02535_N16 /clone_end=3' /gb=DT488227
Pth.10622
WS02535.B21_N16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02535_N16 3', mRNA sequence /clone=WS02535_N16 /clone_end=3' /gb=DT488227
Sbi.12834
IP1_15_B05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA, mRNA sequence /gb=BI074463
Sbi.7914
RHOH1_18_C04.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_18_C04_A002 5', mRNA sequence /clone=RHOH1_18_C04_A002 /clone_end=5' /gb=CN126678 /gi=45952044
Vvi.679
CAbud0006_IVF_C01 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0006_IVF_C01 5', mRNA sequence /clone=CAbud0006_IVF_C01 /clone_end=5' /gb=CF514403

Domain Architecture

LisH PF08513 GRMZM2G060894_P01
DomainStartEndBit scoreE-value
LisH103638.72.3e-08
LUFS12661284.4e-38
SSDP7229550.94.9e-12
WD4055459224.20.00052
WD4059663446.41.1e-10
WD4063967833.77.6e-07
WD40725762291.9e-05
WD4081184923.10.0011

Sequences