Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G063030_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G063030_P01
Family
SET
3D structure (top 5)
1ML9 3H6L 1MVH 3BO5 2R3A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

912028 Score: 1

Zea mays

GRMZM2G043484_P01 Score: 1
GRMZM2G043484_P02 Score: 1
GRMZM2G063030_P01 Score: 1

Arabidopsis thaliana

AT4G02020.1 Score: 1

Zea mays

GRMZM2G043484_P02 Score: 1
GRMZM2G063030_P01 Score: 1
GRMZM2G043484_P01 Score: 0.986

Zea mays

GRMZM2G043484_P01 Score: 1
GRMZM2G043484_P02 Score: 0.988
GRMZM2G063030_P01 Score: 0.988

Oryza sativa subsp. japonica

LOC_Os03g19480.1 Score: 1

Populus trichocarpa

409555 Score: 1

Zea mays

GRMZM2G043484_P01 Score: 1
GRMZM2G043484_P02 Score: 0.995
GRMZM2G063030_P01 Score: 0.995

Sorghum bicolor

4744527 Score: 1

Zea mays

GRMZM2G043484_P01 Score: 1
GRMZM2G043484_P02 Score: 0.954
GRMZM2G063030_P01 Score: 0.954

Selaginella moellendorffii

446978 Score: 1
111860 Score: 0.956

Zea mays

GRMZM2G043484_P01 Score: 1
GRMZM2G043484_P02 Score: 0.995
GRMZM2G063030_P01 Score: 0.995

Zea mays

GRMZM2G043484_P01 Score: 1
GRMZM2G043484_P02 Score: 0.994
GRMZM2G063030_P01 Score: 0.994

Vitis vinifera

GSVIVP00028115001 Score: 1

Expression data

Expressed Sequence Tags

At.3858
Arabidopsis thaliana EZA1 (SWINGER); transcription factor (EZA1) mRNA, complete cds /cds=p(94,2664) /gb=NM_116433
Hv.13199
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf111p06, mRNA sequence /gb=AK251231
Hv.20522
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf111g10, mRNA sequence /gb=AK251149
Os.21566
Oryza sativa (indica cultivar-group) mRNA for enhancer of zeste protein (ez1 gene) /cds=p(216,2903) /gb=AJ421722
Os.96671
CI219033 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks after flowering and supermix Oryza sativa (japonica cultivar-group) cDNA clone 039-M068R-D12 3', mRNA sequence /clone=039-M068R-D12 /clone_end=3' /gb=CI219033
Pba.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Ppa.1646
Physcomitrella patens subsp. patens polycomb group protein (SDG1501) mRNA, complete cds /cds=p(165,2843) /gb=XM_001768136
Pth.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Pth.5102
WS0256.B21_F07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0256_F07 3', mRNA sequence /clone=WS0256_F07 /clone_end=3' /gb=CV245041
Ptp.6029
UL90TA12 Populus leaf cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU811921
Sbi.7196
POL1_41_A10.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_41_A10_A002 5', mRNA sequence /clone=POL1_41_A10_A002 /clone_end=5' /gb=CF487051 /gi=34515920

Domain Architecture

SET PF00856 GRMZM2G063030_P01
DomainStartEndBit scoreE-value
SET744871156.67.5e-44

Sequences