Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G063269_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G063269_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

4885844 Score: 1

Zea mays

GRMZM2G041415_P01 Score: 1
GRMZM2G063269_P01 Score: 1
GRMZM2G124715_P02 Score: 1

Expression data

Expressed Sequence Tags

At.20521
Arabidopsis thaliana MYB4 (myb domain protein 4); transcription factor (MYB4) mRNA, complete cds /cds=p(316,1164) /gb=NM_120023
At.23277
Arabidopsis thaliana MYB3 (myb domain protein 3); DNA binding / transcription factor (MYB3) mRNA, complete cds /cds=p(95,868) /gb=NM_102111
At.28679
Arabidopsis thaliana AtMYB32 (myb domain protein 32); DNA binding / transcription factor (AtMYB32) mRNA, complete cds /cds=p(79,903) /gb=NM_119665
At.4218
Arabidopsis thaliana ATMYB6 (MYB DOMAIN PROTEIN 6); DNA binding / transcription factor (ATMYB6) mRNA, complete cds /cds=p(54,764) /gb=NM_117014
At.5349
Arabidopsis thaliana MYB7 (myb domain protein 7); DNA binding / transcription factor (MYB7) mRNA, complete cds /cds=p(31,840) /gb=NM_127224
Hv.21121
H.vulgare myb2 mRNA /cds=p(44,799) /gb=X70876
Hv.21408
H.vulgare myb1 mRNA /cds=p(212,1015) /gb=X70877
Mtr.9208
Medicago truncatula clone MTYF9_FA_FB_FC1G-F-10 unknown mRNA /cds=m(91,948) /gb=BT052056
Os.10175
Oryza sativa (japonica cultivar-group) Os05g0429900 (Os05g0429900) mRNA, partial cds /cds=p(527,847) /gb=NM_001062156
Os.51540
Oryza sativa (japonica cultivar-group) Os12g0175400 (Os12g0175400) mRNA, partial cds /cds=p(26,940) /gb=NM_001072822
Os.7125
CT851199 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCRN116P12, mRNA sequence /clone=OSIGCRN116P12 /gb=CT851199
Os.72787
CT852975 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCRN116K19, mRNA sequence /clone=OSIGCRN116K19 /gb=CT852975
Os.9336
CT849551 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone CONTIG6869, mRNA sequence /clone=CONTIG6869 /gb=CT849551
Pba.3823
WS02523.BR_J10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_J10 5', mRNA sequence /clone=WS02523_J10 /clone_end=5' /gb=DT478714
Pth.16883
WS02523.BR_J10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_J10 5', mRNA sequence /clone=WS02523_J10 /clone_end=5' /gb=DT478714
Ptp.9121
Populus tremula x Populus tremuloides mRNA for MYB transcription factor R2R3 type (myb gene) /cds=p(1,813) /gb=AJ567346
Sbi.2545
OX1_61_A11.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_61_A11_A002 5', mRNA sequence /clone=OX1_61_A11_A002 /clone_end=5' /gb=CN138063 /gi=45972186
Sbi.8066
WOUND1_59_F10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_59_F10_A002 5', mRNA sequence /clone=WOUND1_59_F10_A002 /clone_end=5' /gb=CN148942 /gi=45990343
Vvi.20893
WIN114.C21_B15 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN114_B15 3', mRNA sequence /clone=WIN114_B15 /clone_end=3' /gb=EC980203
Vvi.3225
CAB30005_Ib_Fb_C02 Cabernet Sauvignon Berry Stage I - CAB3 Vitis vinifera cDNA clone CAB30005_Ib_Fb_C02 5', mRNA sequence /clone=CAB30005_Ib_Fb_C02 /clone_end=5' /gb=CB974921

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G063269_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding146148.33.1e-11
Myb_DNA-binding6711250.37.4e-12

Sequences