Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G075600_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G075600_P01
Family
SET
3D structure (top 5)
2R3A 1H3I 2RFI 1ML9 3H6L
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481208 Score: 1

Arabidopsis thaliana

AT2G23380.1 Score: 1

Carica papaya

evm.TU.supercontig_55.122 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g16390.1 Score: 1

Populus trichocarpa

719252 Score: 1

Sorghum bicolor

4896633 Score: 1

Vitis vinifera

GSVIVP00019523001 Score: 1

Expression data

Expressed Sequence Tags

At.22
Arabidopsis thaliana CLF (CURLY LEAF); transcription factor (CLF) mRNA, complete cds /cds=p(1,2709) /gb=NM_127902
At.3858
Arabidopsis thaliana EZA1 (SWINGER); transcription factor (EZA1) mRNA, complete cds /cds=p(94,2664) /gb=NM_116433
Os.44686
Oryza sativa (japonica cultivar-group) Os06g0275500 (Os06g0275500) mRNA, complete cds /cds=p(294,2984) /gb=NM_001063914
Os.96671
CI219033 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks after flowering and supermix Oryza sativa (japonica cultivar-group) cDNA clone 039-M068R-D12 3', mRNA sequence /clone=039-M068R-D12 /clone_end=3' /gb=CI219033
Pba.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Pth.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Pth.5102
WS0256.B21_F07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0256_F07 3', mRNA sequence /clone=WS0256_F07 /clone_end=3' /gb=CV245041
Sbi.2582
HS1_16_D08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_16_D08_A012 3', mRNA sequence /clone=HS1_16_D08_A012 /clone_end=3' /gb=CD212703 /gi=30950047
Sbi.7196
POL1_41_A10.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_41_A10_A002 5', mRNA sequence /clone=POL1_41_A10_A002 /clone_end=5' /gb=CF487051 /gi=34515920

Domain Architecture

SET PF00856 GRMZM2G075600_P01
DomainStartEndBit scoreE-value
SET772900155.51.6e-43

Sequences