Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G077078_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G077078_P01
Family
C3H
3D structure (top 5)
1OLM 3B7N 1AUA 1R5L 2D4Q
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.14303
Arabidopsis thaliana SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (AT2G16380) mRNA, complete cds /cds=p(113,1756) /gb=NM_127192
At.16183
Arabidopsis thaliana SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative (AT1G19650) mRNA, complete cds /cds=p(589,2199) /gb=NM_001123842
At.19181
Arabidopsis thaliana SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative (AT4G39170) mRNA, complete cds /cds=p(259,2103) /gb=NM_120077
At.19824
Arabidopsis thaliana SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative (AT2G21540) mRNA, complete cds /cds=p(185,1831) /gb=NM_127726
At.26579
Arabidopsis thaliana C7A10_870/C7A10_870 mRNA, complete cds /cds=p(109,1740) /gb=AY050419
At.31489
Arabidopsis thaliana mRNA for can of worms 1 protein (COW1 gene) /cds=p(96,1769) /gb=AJ616026
At.34785
Arabidopsis thaliana SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative (AT1G75370) mRNA, complete cds /cds=p(101,1939) /gb=NM_106191
At.37458
Arabidopsis thaliana SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative (AT3G24840) mRNA, complete cds /cds=p(40,1779) /gb=NM_113396
At.43802
Arabidopsis thaliana unknown protein (AT2G21520) mRNA, complete cds /cds=p(41,1954) /gb=NM_001124884
At.52799
Arabidopsis thaliana SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative (AT2G18180) mRNA, complete cds /cds=p(1,1677) /gb=NM_127375
Hv.1522
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf21o09, mRNA sequence /gb=AK249069
Hv.18075
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf156n02, mRNA sequence /gb=AK252356
Mtr.8154
NF075B11DT1F1092 Drought Medicago truncatula cDNA clone NF075B11DT 5', mRNA sequence /clone=NF075B11DT /clone_end=5' /gb=BF634885
Os.26967
Oryza sativa Japonica Group cDNA clone:J013084O22, full insert sequence /gb=AK066793
Os.27595
Oryza sativa Japonica Group cDNA clone:J023127L07, full insert sequence /gb=AK072532
Os.4058
Oryza sativa Japonica Group cDNA clone:J013052B04, full insert sequence /cds=p(163,2004) /gb=AK066240
Os.49109
Oryza sativa Japonica Group cDNA clone:J023046G11, full insert sequence /cds=p(281,2095) /gb=AK070235
Os.51728
Oryza sativa Japonica Group cDNA clone:001-117-E06, full insert sequence /gb=AK063554
Os.69148
Oryza sativa (japonica cultivar-group) Os02g0440900 (Os02g0440900) mRNA, complete cds /cds=p(1,1680) /gb=NM_001053280
Os.88730
Oryza sativa Japonica Group cDNA clone:J013152L11, full insert sequence /gb=AK100043

Domain Architecture

CRAL_TRIO PF00650 GRMZM2G077078_P01
DomainStartEndBit scoreE-value
CRAL_TRIO11728895.12.5e-25
Prefoldin_234142838.23.4e-08
zf-CCCH57459311.20.051

Sequences