Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G077147_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G077147_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 1GV2 2K9N 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

877443 Score: 1
889207 Score: 1

Zea mays

GRMZM2G077147_P01 Score: 1
GRMZM2G157641_P01 Score: 1

Arabidopsis thaliana

AT1G73410.1 Score: 1

Zea mays

GRMZM2G077147_P01 Score: 1
GRMZM2G157641_P01 Score: 1

Zea mays

GRMZM2G077147_P01 Score: 1
GRMZM2G157641_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g51110.1 Score: 1

Populus trichocarpa

569401 Score: 1

Zea mays

GRMZM2G077147_P01 Score: 1
GRMZM2G157641_P01 Score: 1

Sorghum bicolor

4996805 Score: 1

Zea mays

GRMZM2G077147_P01 Score: 1
GRMZM2G157641_P01 Score: 1

Zea mays

GRMZM2G077147_P01 Score: 1
GRMZM2G157641_P01 Score: 1

Vitis vinifera

GSVIVP00017891001 Score: 1

Expression data

Expressed Sequence Tags

At.10909
Arabidopsis thaliana MYB52 (myb domain protein 52); DNA binding / transcription factor (MYB52) mRNA, complete cds /cds=p(148,897) /gb=NM_101658
At.10910
Arabidopsis thaliana MYB54 (myb domain protein 54); DNA binding / transcription factor (MYB54) mRNA, complete cds /cds=p(221,952) /gb=NM_106001
At.14733
Arabidopsis thaliana MYB105 (myb domain protein 105); DNA binding / transcription factor (MYB105) mRNA, complete cds /cds=p(1,993) /gb=NM_105625
At.15646
Arabidopsis thaliana MYB117 (myb domain protein 117); transcription factor (MYB117) mRNA, complete cds /cds=p(5,847) /gb=NM_102441
At.5969
Arabidopsis thaliana MYB110 (myb domain protein 110) (MYB110) mRNA, complete cds /cds=p(38,955) /gb=NM_001084751
At.7331
Arabidopsis thaliana AtMYB56 (myb domain protein 56); DNA binding / transcription factor (AtMYB56) mRNA, complete cds /cds=p(59,1030) /gb=NM_121786
Os.20412
CT860774 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCSN035L22, mRNA sequence /clone=OSIGCSN035L22 /gb=CT860774
Os.49785
Oryza sativa Japonica Group cDNA clone:J013060F16, full insert sequence /cds=p(420,1157) /gb=AK111560
Os.80485
Oryza sativa (japonica cultivar-group) Os08g0435700 (Os08g0435700) mRNA, complete cds /cds=p(1,1110) /gb=NM_001068417
Os.81269
Oryza sativa Japonica Group cDNA clone:002-129-A05, full insert sequence /gb=AK107461

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G077147_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding45054.93.1e-13
Myb_DNA-binding5610150.75.5e-12

Sequences