Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G078379_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G078379_P01
Family
C3H
3D structure (top 5)
2BZE 1V32 1WH2 2Z5S 1UHR
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

906461 Score: 1

Arabidopsis thaliana

AT3G51120.1 Score: 1

Carica papaya

evm.TU.supercontig_6.209 Score: 1

Oryza sativa subsp. japonica

LOC_Os10g36810.1 Score: 1

Populus trichocarpa

219537 Score: 1

Expression data

Expressed Sequence Tags

Hv.25150
BJ471970 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal28n18 5', mRNA sequence /clone=baal28n18 /clone_end=5' /gb=BJ471970
Mtr.13307
EST647475 HOGA Medicago truncatula cDNA clone HOGA-32C15, mRNA sequence /clone=HOGA-32C15 /gb=CB894683
Os.78568
Oryza sativa (japonica cultivar-group) Os10g0511800 (Os10g0511800) mRNA, complete cds /cds=p(1,2118) /gb=NM_001071576
Os.86087
NEW_RNG123-D03 Rice mixture of leaf, root, panicle Oryza sativa (japonica cultivar-group) cDNA, mRNA sequence /gb=EE590805
Os.96422
SSH001438 Salt stress SSH library Oryza sativa (indica cultivar-group) cDNA, mRNA sequence /gb=EX451381
Sbi.7302
PIC1_20_B12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM328019

Domain Architecture

SWIB PF02201 GRMZM2G078379_P01
DomainStartEndBit scoreE-value
SWIB17525074.53.8e-19
Plus-3312419146.11.1e-40
GYF59364134.35e-07
zf-CCCH146714915.50.29

Sequences