Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G078867_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G078867_P01
Family
E2F-DP
3D structure (top 5)
1CF7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

485177 Score: 1

Arabidopsis thaliana

AT3G48160.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g50630.1 Score: 1

Ostreococcus tauri

34401 Score: 1

Physcomitrella patens

231478 Score: 1
88654 Score: 1

Zea mays

GRMZM2G024688_P01 Score: 1
GRMZM2G060000_P01 Score: 1
GRMZM2G078867_P01 Score: 1
GRMZM2G024688_P02 Score: 0.99
GRMZM2G060000_P02 Score: 0.99

Expression data

Expressed Sequence Tags

Hv.28959
HDP12L12w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP12L12, mRNA sequence /clone=HDP12L12 /gb=EX590291
Os.47376
Oryza sativa Japonica Group cDNA clone:J013041C09, full insert sequence /gb=AK111537
Os.50197
Oryza sativa Japonica Group cDNA clone:002-186-D11, full insert sequence /gb=AK120032
Sbi.8440
RHOH1_46_B03.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_46_B03_A002 5', mRNA sequence /clone=RHOH1_46_B03_A002 /clone_end=5' /gb=CN131200 /gi=45960401

Domain Architecture

E2F_TDP PF02319 GRMZM2G078867_P01
DomainStartEndBit scoreE-value
E2F_TDP50115113.38.4e-31
E2F_TDP194274119.11.5e-32

Sequences