Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G081557_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G081557_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os04g50680.1 Score: 1

Expression data

Expressed Sequence Tags

At.10920
Arabidopsis thaliana AtMYB74 (myb domain protein 74); DNA binding / transcription factor (AtMYB74) mRNA, complete cds /cds=p(104,1078) /gb=NM_116749
At.2261
Arabidopsis thaliana ATM4/ATMYB102 (ARABIDOPSIS MYB-LIKE 102); DNA binding / transcription factor (ATM4/ATMYB102) mRNA, complete cds /cds=p(109,1161) /gb=NM_118264
At.2669
Arabidopsis thaliana AtMYB41 (myb domain protein 41); DNA binding / transcription factor (AtMYB41) mRNA, complete cds /cds=p(1,849) /gb=NM_118951
At.4502
Arabidopsis thaliana At4g17780 mRNA for putative MYB transcription factor, complete cds, clone: RAFL21-07-A19 /cds=p(65,1147) /gb=AK118728
At.5394
Arabidopsis thaliana AtMIXTA/AtMYB16 (myb domain protein 16); DNA binding / transcription factor (AtMIXTA/AtMYB16) mRNA, complete cds /cds=p(224,1204) /gb=NM_121535
At.5999
Arabidopsis thaliana putative transcription factor (MYB92) mRNA, complete cds /cds=p(260,1264) /gb=AF062916
At.974
Arabidopsis thaliana AtMYB17 (myb domain protein 17); DNA binding / transcription factor (AtMYB17) mRNA, complete cds /cds=p(305,1204) /gb=NM_115989
At.9932
Arabidopsis thaliana AtMYB9 (myb domain protein 9); DNA binding (AtMYB9) mRNA, complete cds /cds=p(326,1336) /gb=NM_203063
Hv.26413
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf180h20, mRNA sequence /gb=AK248651
Hv.26842
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf97l09, mRNA sequence /gb=AK248579
Mtr.19694
EST1224335 MTY Medicago truncatula cDNA clone MTYA430, mRNA sequence /clone=MTYA430 /gb=DW015374
Os.3390
O.sativa mRNA for myb factor, 1355 bp /cds=p(116,1222) /gb=Y11415
Os.57514
Oryza sativa Japonica Group cDNA, clone: J100049K04, full insert sequence /cds=p(91,1113) /gb=AK243271
Os.78787
Oryza sativa (japonica cultivar-group) Os06g0221000 (Os06g0221000) mRNA, complete cds /cds=p(1,969) /gb=NM_001063709
Os.80488
Oryza sativa (japonica cultivar-group) Os08g0486300 (Os08g0486300) mRNA, complete cds /cds=p(1,1074) /gb=NM_001068630
Os.80737
Oryza sativa (japonica cultivar-group) Os06g0112700 (Os06g0112700) mRNA, complete cds /cds=p(1,1104) /gb=NM_001063130
Os.80847
Oryza sativa Japonica Group cDNA, clone: J090031E07, full insert sequence /gb=AK288415
Os.83361
Oryza sativa (japonica cultivar-group) Os02g0579300 (Os02g0579300) mRNA, complete cds /cds=p(1,1029) /gb=NM_001053764
Os.86759
Oryza sativa Japonica Group cDNA, clone: J100067L15, full insert sequence /cds=p(240,1193) /gb=AK243428

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G081557_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding5510445.12.7e-10
Myb_DNA-binding110155445.8e-10

Sequences