Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G081564_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G081564_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 1GV2 2K9N 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

491433 Score: 1

Arabidopsis thaliana

AT4G32730.2 Score: 1

Carica papaya

evm.TU.supercontig_78.68 Score: 1

Physcomitrella patens

135480 Score: 1

Populus trichocarpa

561783 Score: 1

Sorghum bicolor

5009420 Score: 1

Vitis vinifera

GSVIVP00032465001 Score: 1

Expression data

Expressed Sequence Tags

At.11889
Arabidopsis thaliana putative MYB family transcription factor (At3g09370) mRNA, complete cds /cds=p(169,1686) /gb=AY034964
At.2235
Arabidopsis thaliana PC-MYB1 (myb domain protein 3R1); DNA binding / transcription factor (PC-MYB1) mRNA, complete cds /cds=p(309,3296) /gb=NM_202989
At.3762
Arabidopsis thaliana ATMYB3R2/MYB3R-2/PC-MYB2 (MYB DOMAIN PROTEIN 3R2, PUTATIVE C-MYB-LIKE TRANSCRIPTION FACTOR); DNA binding / transcription factor (ATMYB3R2/MYB3R-2/PC-MYB2) mRNA, complete cds /cds=p(227,1444) /gb=NM_178945
At.5132
Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4 (MYB3R4) mRNA, complete cds /cds=p(328,3213) /gb=AF371975
At.63784
Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-5 (MYB3R5) mRNA, complete cds /cds=p(87,1733) /gb=AF371976
Hv.8676
Hordeum vulgare putative c-myb-like transcription factor (MYB3R-1) mRNA, partial cds /cds=p(1,592) /gb=AF189788
Mtr.22370
Medicago truncatula clone MTYFL_FM_FN_FO1G-A-18 unknown mRNA /cds=p(144,1844) /gb=BT053144
Os.38177
Oryza sativa Japonica Group cDNA clone:J013069B18, full insert sequence /gb=AK066520
Os.54784
Oryza sativa (japonica cultivar-group) Os05g0459000 (Os05g0459000) mRNA, complete cds /cds=p(216,1982) /gb=NM_001062283
Ppa.10
Physcomitrella patens putative c-myb-like transcription factor (MYB3R-1) mRNA, partial cds /cds=p(1,1797) /gb=AF189786
Ptp.477
Populus tremula x Populus tremuloides mRNA for MYB transcription factor R3 type (myb gene) /cds=p(1,1593) /gb=AJ567344
Sbi.7520
GABR1_17_E07.b1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_17_E07_A002 3', mRNA sequence /clone=GABR1_17_E07_A002 /clone_end=3' /gb=CX614936 /gi=57813719

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G081564_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding398554.25e-13
Myb_DNA-binding9113643.86.7e-10

Sequences